KEGG   Cannabis sativa (hemp): 115699520
Entry
115699520         CDS       T08987                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    115699520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csav03400]
    115699520
DNA repair and recombination proteins [BR:csav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     115699520
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 UBM
Other DBs
NCBI-GeneID: 115699520
NCBI-ProteinID: XP_030482838
LinkDB
Position
8:48451667..48460701
AA seq 1613 aa
MGVHGLWELLAPVGRRVSVETLSGKKLAIDASIWMVQFMKAMRDEKGEMIRNAHLLGFFR
RICKLLYLRTKPVFVFDGGTPALKRRTVIARRRMRENAQAKLRKTAEKLLLNHLKAMKLK
EIAEGIKNQRQKNDAKGKKVLSDQDNLVGNDFGKEDVSSINCNQEKLDEMLAASIMEDDL
ASNSTKSTSIPFEEDGWDDEEMILPDMHGGVDPAVLDALTPSLQLDLKQKQKQDNVDKGK
KIMLDEAGINVGRDNVVSSSLNQEKLDEMLAASLMEEESWSFYNKASTSTTPYPVEEDGD
MDEDENGDEEMILPAMDGEVDPSILAALPPSMQLDLLVQIRERLMAENRQKYQKVKKDPA
KFSELQIEAYLKTVAFRREIDQVQKVASGRGVDGVQTSRIASESNREFIFSSSFTGDKQA
LSARTEKYGDKQQEEDPSSVMHAPASTIKSNNVNGSKPNNPRRAFDDNIETYHDERGRIR
VSRVRAMGIRMTRDLQRNLDLMKEIENERTNVECLINESNHAVPETSSGKEFLETSCGGA
DSVTLDCTNEDSVVNNGASVEISFEDDGDIKCFEGDDEIFARLVEENPLKLSSDNIMSSR
NMSCSSDSDCSWEEGTTEAKDKSFSDDVNLRTELPCKGNSIDDSEVEWEEGVCEFTEHAS
SDSKKATSKGNLEENAELQEAIRRSLEDLDAQKSNFAMPEDDKLEIANGYSSEGNGITDS
EDRVEGPVSPGNDCTKQNRLTCKILGNVETLNDVDLVSISKTSDSSGNPDNSRIMIGSPC
EVRISSMEQPMQDANKSANLSNEAQAPHAEYVAPVKVKEVNVAGEGLLCTSNKVDGFSTS
FDKFAKGGSHSSVLCDDGPDDVVEDQKIATEAKTSSNLVEATGKAVCSSKAVTNDLIRDV
ENEDNLASKIGQEKIPQEIEHSLENSSFKNNDGLRVEVTEASLEEEIQVLAQERMDLGDE
QGRLERNAESVSSEMFTECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDV
FLFGARSVYKNIFDDRKYVETYFMKDIEKELGLTREQLIRMALLLGSDYTEGVSGIGIVN
AIEVVNAFPEEDGLQKFRDWIESPDPTILGKFDNEKDSIAKKKGLKIGNNVKNSKSKMEE
ASASHENISEDQEQQSADHTQDIKKIFMDKHRKVSKNWHIPPIFPSEAVISAYICPQVDK
STEPFTWGKPDHFVLRKLCWDKFCWGSQKADDLLLPVLKEYNKHETQLRLEAFYTFNERF
AKIRSKRIKKAVKGIAGKPSLELMDDVVEEVSGSKKKRERPDGSGDDQSEKLPQETEQSV
ARNQSKYRKKSTPKQSKKQKMPKDGLVSESPSLPDDRGEISKKSRVSGSCRGRGRGRGRI
AGRGKGKGVPKTSSSSSDGENENDDDVEEIQVETFEKPLEVRKSSRLRKPVSYTANDSDI
DDHDKLFDGEASERDLFENANSSLGQNEKHDVENPSPRNGLDGDYLEEGGGFCPDSGEND
QPSVSQLGVSHLESDVCEEYYKTGGGFCMEESETGPDDSSISGQGPAAVLDNSYLFHCSG
MESTEACVSEPIIDQAKSAANDEQSKSRGLSPEMNPVGTLQAMPYLRKKRRKR
NT seq 4842 nt   +upstreamnt  +downstreamnt
atgggagttcacggtctttgggaattactggcccccgtcggtcgccgcgtctccgttgaa
accctatccggaaagaagcttgccatcgatgccagtatatggatggtgcagttcatgaag
gcgatgagggacgaaaagggagagatgataaggaacgctcatttgcttggattctttcgc
aggatttgcaagcttttgtacctacggaccaagcctgtctttgtcttcgatggtggaact
ccggcactcaagcgccgaaccgtcattgcgagacgaagaatgcgtgagaatgctcaggct
aaactccgaaaaactgccgagaaattgttgcttaaccatcttaaggcgatgaagctgaaa
gagatagcagagggcattaagaatcagaggcaaaagaatgatgccaagggtaagaaggtt
ttgagtgatcaggacaacttggtaggcaatgattttgggaaagaggatgtgagctccatt
aattgcaatcaggaaaagctggatgaaatgctggctgcatctattatggaagacgattta
gctagcaactcaacaaagtctacttctattccttttgaggaagatggttgggatgatgag
gaaatgatactaccagatatgcatggtggagttgatccagctgtattagatgctttaaca
ccgtctctgcaacttgatctgaagcagaaacagaagcaggataatgttgataagggtaag
aagatcatgctagatgaagcagggatcaatgtagggagggacaatgtggtgtcaagcagt
ctcaaccaggagaagttagatgaaatgttggcagcatctctcatggaagaagaaagttgg
agtttttataacaaagcatcaacatctactactccttatcccgttgaggaggatggtgat
atggatgaagatgagaatggtgatgaagagatgatactgccagcaatggatggtgaagtt
gatccttccatactagctgctttgcctccatcaatgcaacttgaccttcttgttcaaatt
agagaaagactgatggctgaaaacaggcagaagtatcaaaaggtcaagaaggaccctgca
aagttttctgagttacagatagaagcatatcttaagactgttgctttccgccgggagata
gatcaagtgcaaaaggttgcttctggaagaggagtagatggtgtacagacttcccgaata
gcatctgaatctaacagagaatttatcttctcatcatctttcaccggtgataaacaggca
ctgtctgcgagaactgagaaatatggagataagcaacaggaagaagatccttcaagtgtc
atgcatgctcctgcgtctaccattaagtctaacaatgtgaatggatcaaaacccaacaac
ccgagaagggcttttgatgacaatattgagacatatcatgatgagagagggcgaattcgt
gtaagtagagtgagagctatgggtattcgcatgacccgtgatttacaaaggaatttggac
ttgatgaaagagattgaaaatgagaggacgaatgttgagtgtttgataaatgaaagtaat
catgcagttccggaaacttcatctggtaaagaatttttagaaacttcttgtggtggtgct
gattctgttacattggattgtacaaatgaagattctgtggttaataatggtgcatctgtg
gagatttcttttgaagatgatggtgacatcaagtgttttgaaggtgatgatgagatattt
gctcgtttagtagaagaaaatcctcttaaactatcgtctgataatatcatgtcatcaagg
aacatgtcttgtagttctgattcagactgttcctgggaggaaggtactactgaggcgaaa
gataaaagtttctcagatgatgttaacctcagaactgaactcccttgtaaaggcaatagc
attgatgatagtgaagtggaatgggaggaaggagtgtgtgaatttactgaacatgcttcc
tctgattcaaaaaaggcaacttccaaaggtaatttagaagaaaatgctgaattgcaggag
gcaataaggagaagtctggaggatttagatgctcagaaatctaattttgcaatgcctgaa
gatgacaaactggaaattgccaatggatattctagtgaaggtaatgggattactgactca
gaagacagggtagaagggccagtttctccagggaatgattgtacaaaacaaaacagatta
acttgtaaaattttgggtaacgttgaaactctgaatgatgtggatcttgtaagtatctca
aaaacctctgattcttctggtaatcctgataattcgaggataatgattgggtcaccatgt
gaagttcgcatcagttctatggaacaacccatgcaagatgcaaataaaagtgctaatttg
tccaacgaagcacaagcaccacatgcagaatatgttgctcctgtaaaagtaaaagaagtc
aatgtggctggggaaggtcttctctgtacttctaataaggttgacgggttctctacctct
tttgataagttcgctaaaggtggttctcactcatctgttttgtgtgatgacggtcccgat
gatgtggttgaagatcagaaaattgctactgaagctaaaacatcatccaatttggttgag
gcaaccggcaaagctgtctgttcatcgaaagcagtgacaaatgatttaatacgtgatgtt
gagaatgaagataatttagcttcaaagataggtcaggaaaaaattccccaagaaattgag
catagcttggagaattcttcatttaagaacaatgatggtttacgggttgaagttacagag
gctagtctagaggaagaaattcaagttttagcccaagaacgtatggatcttggagatgag
cagggtaggctggaacgtaatgcagaatctgttagtagtgagatgttcacagaatgtcag
gagctactgcaaatgtttggattaccatatatcattgcaccaatggaggccgaagcacag
tgtgcttatatggagctagcaaaccttgttgatggtgttgtgactgatgactcagatgtt
ttcttgtttggagcacgaagtgtttacaagaatatatttgatgatagaaaatatgttgag
acatacttcatgaaggacattgagaaggagcttggtctaacaagagagcagttgattcgc
atggcacttcttcttggtagtgattatactgaaggtgtcagtggtataggcattgttaat
gctattgaggttgtaaatgcgtttcctgaggaagatggcctccaaaaattccgggactgg
attgaatcaccggatcctactatattggggaagtttgataacgaaaaagattcaattgca
aagaaaaaagggttaaaaattggcaataacgtgaaaaattcaaaaagcaaaatggaagaa
gcatctgcatctcatgaaaacatttctgaggatcaagaacagcagtctgccgatcatact
caggacataaagaaaatatttatggataagcatagaaaagtgagcaaaaactggcatata
cctccgatatttcctagtgaagctgttatttctgcttacatttgtcctcaagtagataag
tcaaccgagcctttcacatggggaaagcctgatcattttgttcttcgcaaattgtgttgg
gacaaattttgctggggtagccagaaggcagatgatttattactacctgttctgaaggag
tacaataaacatgagactcaactacgtttggaagcattttacacattcaatgaaagattt
gctaaaattcgaagcaagagaattaagaaggctgttaaaggaattgctggaaaaccatcc
ttggagttaatggatgacgttgtagaagaagtttctggatctaaaaagaaaagagaaaga
cctgatggatctggggatgaccaatcagagaaacttccacaggaaacagagcaaagtgtt
gccagaaaccagagcaagtataggaagaaatcaactcccaagcaatcaaagaaacaaaag
atgcccaaggatgggcttgtgtccgaatcaccgtcactaccagatgacagaggagaaatt
agtaagaaatcacgtgtgagtggaagttgcagaggaagaggaagaggaagaggtaggatt
gcaggaagagggaaggggaaaggagtaccaaaaaccagctccagctccagtgatggtgag
aatgagaatgatgatgatgtggaagaaattcaagttgaaacatttgaaaagccactagaa
gtgcgaaagtcatcacgattgcggaagcctgtaagctacaccgcaaatgactcagacatt
gatgatcatgacaaattatttgatggcgaggcatcagaaagagatttatttgaaaatgct
aattctagtcttggtcaaaatgaaaagcatgatgttgaaaatccttctcccagaaacggc
ttggatggagactatcttgaagaaggtgggggtttctgtccagatagcggagaaaatgac
caaccaagtgtgagccaacttggtgtttcccatcttgagtctgatgtttgtgaagaatac
tataagactggaggagggttttgcatggaagaaagtgaaaccggcccagatgacagtagc
atttctgggcaaggtccagctgctgtcttagacaattcgtatcttttccattgttctgga
atggagagcacagaggcatgtgtttcagagccaattattgatcaggcaaaatccgcagcg
aatgatgaacagtcaaaatcacgtgggttgtcgccagagatgaatcctgtgggaactcta
caagccatgccttacctgagaaagaaacgaaggaagaggtga

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