KEGG   Cannabis sativa (hemp): 115699522
Entry
115699522         CDS       T08987                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    115699522
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csav03021]
    115699522
Enzymes [BR:csav01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     115699522
Transcription machinery [BR:csav03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     115699522
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 PAAR_motif
Other DBs
NCBI-GeneID: 115699522
NCBI-ProteinID: XP_030482844
LinkDB
Position
X:complement(80374426..80380848)
AA seq 1192 aa
MGASSDPKEDIAMSSKGDKFSNTTEMDIDDDDDDFDDDKCMEPASIKHLGAGFLQKFCKD
ASVAFFKEYGLISHQINSYNDFIRNGAKRVFESFGELTVEPGYDPSKKTEIWRYASVRFG
EVRLVQPTFWGGSAKDKEYNMLPRHARLQNMTYSSRIYVTVNIEVYTQEMTSSDKFKTGK
AQYLDKKVVSSESKEVMIGKIPVMVKSDLCWMKEAEKDDCDFDRGGYFIVKGAEKTFIAQ
EQICRKRLWISSHPFLTVAFQSEVKRNRLIIRLAPSQVEDAKPEKVLTVYFLSTEIPVWI
LFFALGVSSDREVVDLIDFATDDASISNILFASISTADKACDGFRKSQAALTHVDKQLKK
TLFPPKESIEECLSMYMFPNLRSTQQKARFLGYMVKCLLQAATGRRKLNNKDDFRNKRLD
LAGELLERELRAHVSHARKRMAKALQRDLYGERPLRPIEFYLDASIVTNGLSRAFSTGAW
CHPFKRTERISGVVANVGRTNPLQTIVDMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLA
TPDGENCGLVKNLGTTGLVSLEVAESLVSKLCDSGMEKLVNDTSTPLDGKDKVFLNGDWV
GVCVDSLAFVWRLRKMRRRKELPREVEIKRDKTHGEVNIFSDAGRILRPLLVVENLGKLT
QSKAGKYTFRSLLDRGIVEFIGAEEEEDCRTAWGIKFLFMEDKGKPVEYTHCELDMSFLL
SVSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQLHYPQRPLFRTII
SDCLGKPGYPKNECYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEV
DNTESLDKKMKADECINFGKIPSKIGRVDSLDDDGFPFVGANLQSGDIVIGRCAESGVDH
SIKLKHTEKGMVQKVVLSSNDAGKNFAVVSLRQVRTPILGDKFSSMHGQKGVLGFLESQE
NFPFTIQGIVPDVVINPHAFPSRQTPGQLLEAALGKGIALAKGIPVRHATPFSTPSVDAI
TEQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLVHMAEDKVKFRNTGPVHPLT
RQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMHICQKCQNIAYIIQR
ALAGGRKVRGPYCRICESADDIVKVDVPYGAKLLSQELFSMGIALKFETQIC
NT seq 3579 nt   +upstreamnt  +downstreamnt
atgggagcgtcctcggatcccaaggaagatatagctatgagtagcaagggagataagttt
tcaaataccactgaaatggatatagatgatgatgatgatgattttgatgatgacaagtgt
atggaaccagcaagcataaagcatctgggagctggttttttgcagaaattctgcaaggat
gcttcagtagcattcttcaaagagtatggactcatcagtcaccagataaactcgtacaac
gatttcatcagaaatggcgcaaagagggtttttgagtcgtttggcgagcttacagttgag
cctggctatgacccatcgaaaaagacagagatttggcgatatgcttcagtgcgttttggc
gaggttagacttgttcagccaaccttttggggtggttctgccaaagataaagagtacaat
atgttaccgaggcacgctcgactacagaacatgacttactcgtcaaggatttatgtgaca
gttaatattgaggtgtatactcaagaaatgactagtagtgacaaattcaaaactggaaag
gcgcaataccttgacaagaaggttgtaagttcggagtctaaagaggtcatgattggaaag
attccggtgatggtaaagtctgacctttgttggatgaaggaggcagagaaagatgactgt
gattttgatcgtggaggctattttatagtcaagggcgcagaaaagacatttattgctcaa
gagcagatatgtaggaagagactttggataagtagtcatccttttctgacagttgcattc
caatcagaagtaaagaggaataggttaattattaggctagcgcccagccaagttgaagat
gctaaaccagagaaggtccttactgtttactttttgtcaactgagattcctgtatggatt
ttgttctttgcccttggcgtgtcatccgacagggaagttgtggatctcattgattttgcc
actgacgatgctagcatttccaatatactctttgcatcaattagtactgctgacaaggca
tgtgatggctttcgtaaatcccaagcagctctcactcacgttgataaacagcttaagaag
actttgtttcctcctaaagaaagcattgaagaatgccttagtatgtatatgtttccaaat
ctgagaagcacacagcaaaaggctcgttttctaggttatatggtgaagtgccttctgcag
gctgctactggtcgtagaaaattgaataacaaggatgattttagaaataagagattagat
ttagccggtgagttgctagagcgagagctaagggctcatgtttcccatgcacggaagcgc
atggctaaggctttgcaaagggacctttatggagaaaggccattgcggccgattgaattc
tatttggatgcctctatagtcacaaatggtttatcgagagctttctcaactggggcatgg
tgtcatcctttcaagcggacagaaaggatttcaggggtagtggcaaatgttggccgaaca
aatccactgcagacaattgtagatatgagaaaaacacgccagcaagttcagtacactggg
aaggttggagatgctagatacccgcatccttcccactgggggaaggtttgctttttggct
accccggacggtgaaaattgtgggcttgtgaaaaatttgggtacaactggattagtaagt
ttagaagtagcagaatccctcgtttccaagttgtgcgatagtggcatggagaaattggtg
aatgatacttcgacaccacttgatgggaaagataaagtatttctcaatggggattgggta
ggagtttgtgtcgattcccttgccttcgtttggagactgaggaaaatgcggcgcagaaag
gaattgccgcgcgaggtggaaattaaaagagacaaaactcacggggaagttaatatattt
tctgatgctggaagaattttgcgtccccttctagttgttgagaatttgggtaagcttaca
caatctaaagctggaaaatacaccttccgatctcttcttgataggggaatagttgagttt
attggagctgaagaagaggaggattgccgaactgcatggggtatcaaatttcttttcatg
gaagataagggaaagcctgttgaatatacacactgtgaactggacatgtcttttttgttg
agtgtaagctgtggaatcataccatttgcaaatcatgaccatgcaaggagagtcttgtat
caggctcagaagcattctcaacaggctattggcttttcaacaacaaatcctaatatcaga
gtagatactttgtctcaccaattgcattatccccaaaggcccctctttcgaacaataatc
tctgactgtcttggaaaaccaggttatccaaagaatgaatgctacaatggccagaacgcc
attgttgctgtcaatgttcaccttggctacaaccaagaagattccttggtgatgaaccga
gcttctttggagcgcggtatgtttcgatctgaacacattagaagctataaggctgaggtt
gacaatacggaatcattagacaaaaagatgaaggctgatgaatgcatcaattttggaaag
ataccaagtaaaattggtcgtgtggatagcttagatgatgatggttttccttttgttggt
gcgaacctacagagtggtgatatagttataggtaggtgtgctgaatctggggttgatcat
agtattaaactgaagcacactgaaaaggggatggttcagaaggtcgtactctcctctaat
gatgctggaaaaaactttgctgtggtctctctcagacaggttcgtacgccaattcttgga
gacaaattctcgagcatgcacggacagaagggtgttttgggctttttggaatcccaagaa
aacttcccttttacgattcaaggaatagttccagacgttgtcatcaatccacatgcattt
ccatcgcgacaaactccaggtcaacttctggaggctgctttaggaaaagggattgcttta
gcaaaggggatcccagtgagacatgccacccctttctccactccctcggttgatgctatc
acagaacagctgcacagggctggattttcaagatgggggaatgagagagtatacaatggc
cgaacaggtgagatggttcgttcgcttatctttatggggccaactttctaccagcgtctg
gttcacatggctgaagataaagtaaaattccgaaacactggccctgtccaccctctaact
cgtcagccagtggctgatcgtaagcgatttggtggggtcaagtttggggagatggagcga
gactgcctgctagcccatggtgcatcagcaaacttgcatgaacgactctttactctgagt
gactcttcccaaatgcatatttgccaaaaatgccaaaatattgcttacattatccaacgt
gcgttggctggtggcaggaaggtcaggggtccgtattgtaggatatgcgagtcagctgac
gacattgttaaggtcgatgtgccttatggggccaagttgttgagccaggaactcttcagc
atggggattgcattaaagtttgaaacccagatttgctga

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