Cannabis sativa (hemp): 115699680
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Entry
115699680 CDS
T08987
Name
(RefSeq) phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00906
Carotenoid biosynthesis
csav01100
Metabolic pathways
csav01110
Biosynthesis of secondary metabolites
Module
csav_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
115699680
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csav01006
]
115699680
Enzymes [BR:
csav01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
115699680
Prenyltransferases [BR:
csav01006
]
Terpene biosynthesis
Squalene/phytoene synthase
115699680
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HTH_25
Motif
Other DBs
NCBI-GeneID:
115699680
NCBI-ProteinID:
XP_030483062
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Position
8:complement(47341002..47343263)
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AA seq
404 aa
AA seq
DB search
MSSVVLWVHVSPKESISSVLSFVGSKNGGTKRSKMWCNNNNNKLSLSSGVWAYSGTVANP
ARSSEEKVYEVVLKQAALVREQRKPKEKNLNLNPPTIQTDGTTNWGLLNEAYDRCGEVCA
EYAKTFYLGTMLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPKALDRWENRLSDLFE
GRPFDMYDAALSHTVSKYPVDIQPFKDMIEGMRLDLRKSRYNNFDELYLYCYYVAGTVGL
MSVPVMGIAPESKASTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELARAGL
SDEDIFRGKVTDKWRNFMKGQIKRARMFFDEAEKGVCELSSASRWPVWASLLLYRQILDA
IEANDYDNFTKRAYVGKAKKLLSLPLAYTKAVLIGPSSSSTTFS
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtgttgttctttgggtacatgttagtcctaaagagagtataagctctgtgttg
agctttgttgggagcaaaaatggtggaacaaagaggtcaaaaatgtggtgtaataataat
aataataagttgagtttgtcaagtggggtttgggcttactcgggcacagttgcgaatcca
gcaaggtcttcagaagagaaggtgtatgaagttgtgcttaaacaagctgctctggttcga
gagcagaggaaacccaaagagaaaaatttgaacttgaatccacccaccattcaaactgat
ggaaccaccaattggggtctcttgaatgaagcttatgatcgttgtggtgaagtctgtgct
gaatatgccaagactttttatctgggcacaatgcttatgacaccagaaagaaggaaagct
atttgggccatttatgtgtggtgtagaaggactgatgagcttgtggatgggccaaacgct
tcacacatcacaccaaaggctcttgacagatgggaaaatagactaagtgatctctttgaa
ggtcggccttttgatatgtatgatgctgctctgtctcatacagtctcaaaataccctgtt
gatattcagccctttaaggacatgatagaaggaatgagattagacttgagaaaatcaaga
tacaacaactttgatgaactatacctttattgttactatgttgctggaactgttgggctt
atgagtgttccagttatgggaatagcaccagaatcaaaggcttcaactgagagtgtttac
aatgctgcattggctcttggcatagctaatcaactcactaacatacttagagatgttgga
gaagatgctagaagaggaagagtgtatctcccacaagacgaattagcgcgagcagggtta
tcagatgaagacatttttcggggtaaagtaaccgataaatggaggaatttcatgaagggg
caaataaagagagcaagaatgttctttgatgaggctgagaagggtgtttgtgagctaagc
tcagctagtagatggcctgtgtgggcatcattgttgctatatcgacagatattggatgca
attgaagccaatgattatgataactttactaaacgtgcttatgtaggaaaagcaaagaaa
cttctatctttacctttggcttataccaaagcagtactcattggcccttcctcctcttca
acaacattctcctag
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