Cannabis sativa (hemp): 115699717
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Entry
115699717 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115699717
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csav03009
]
115699717
04121 Ubiquitin system [BR:
csav04121
]
115699717
Ribosome biogenesis [BR:
csav03009
]
Eukaryotic type
90S particles
Other 90S particles
115699717
Ubiquitin system [BR:
csav04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115699717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Sof1
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
ANAPC4_WD40
NBCH_WD40
WD40_RFWD3
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
eIF2A
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_WDR19_1st
PROPPIN
Beta-prop_SPT8
VID27
3-PAP
Motif
Other DBs
NCBI-GeneID:
115699717
NCBI-ProteinID:
XP_030483105
LinkDB
All DBs
Position
8:38973626..38978758
Genome browser
AA seq
452 aa
AA seq
DB search
MKVKVISRSTDEFTRERSQDLQRVFRNFDPNIRSQEKAVEYVRALNAAKLEKIFARPFIG
AMDGHMDAVSCMTKNPNHLKGIFSGSMDGEIRLWDLATRQTVCKFPGHQGAVKGVAASTD
GRLLVSCGTDCTVRLWNVPSSDVVEPSDSTEKSTQALEEYVWKNAFWAVDHQWNGDRFAT
AGAGVHIWNHNKSVPEKIFEWGTDTVISVRFNPGEPNVLATTATDRGIVLYDLRTSKEVT
KIIMRTRTNSIAWNPMEPINFTAANEDSNCYSYDARKLSEAKCVHKDHVSAVMDIDYSPT
GREFVTGSYDRTVRIFPFNGGHSREIYHTKRMQRVFSVKFSCDGTYVISGSDDTNLRLWK
AKASEQLGVLLPREQKKHEYQEAVKNRYKHLPDVKRIVRHRHLPKPIYKATNLKRTMTDA
ERRKEERRKAHSTPGSITTQPLRKKRIVKVVE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcaaagtaatctctcgttccacagacgaattcactcgagaacgaagccaagat
cttcagagggtattccgtaatttcgaccccaacattcgaagccaagagaaagctgtcgag
tatgttcgggctctcaacgccgccaaattggagaagatatttgcgaggccgtttattgga
gcaatggatgggcacatggatgctgtttcgtgcatgaccaagaatcctaaccacttgaaa
ggaattttttcgggctcaatggatggagaaattcgtctttgggatttagctacaaggcaa
acagtttgcaaatttcctggccaccaaggagctgtaaaaggtgtagctgcatctacagat
ggacgcctccttgtttcttgtggcactgattgcactgtcaggctttggaatgtcccttct
tctgatgtagtggaaccaagtgactcaactgaaaaatctactcaggccctggaagaatat
gtttggaagaacgcattttgggctgttgatcaccagtggaatggtgatcgctttgccact
gctggagcaggagttcatatatggaatcacaataagtcagtgccagaaaagatatttgaa
tggggtacagacacggtgatatctgttcgattcaatcctggagagccaaatgtcttagca
acaaccgcaactgaccgcggtattgtactgtatgacttgcggacgtcaaaagaagtaaca
aagataataatgaggacaagaaccaattccattgcttggaatcctatggagccaataaat
ttcactgctgcaaatgaagactccaattgctatagttatgatgctaggaagctcagtgaa
gctaagtgtgtacataaagatcatgtttctgcagtgatggatattgattattctccaact
ggtcgggaattcgtgactggttcttatgatagaacagtaagaattttcccatttaatggt
ggtcacagccgagaaatttatcatacaaagagaatgcaaagggtgttttctgttaaattc
agctgcgatggaacttatgttatttctggtagtgatgacaccaaccttagactttggaag
gctaaagcatcagaacaattgggagttcttcttccgagagaacagaaaaagcacgagtat
caagaggctgtcaagaaccgctacaagcacctacccgatgtcaagcgaattgtgagacat
agacatttgcccaaaccaatatacaaggccactaatctcaagcgcaccatgacagatgct
gaaagaagaaaagaagagaggaggaaggcacacagtacccctggaagtattaccacacag
cccttgcgtaaaaagagaatcgtaaaagtagtagagtaa
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