KEGG   Cannabis sativa (hemp): 115699723
Entry
115699723         CDS       T08987                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
csav  Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:csav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csav03041]
    115699723
Spliceosome [BR:csav03041]
 Complex B
  Other components
   Complex B specific factors
    115699723
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz EIF3I WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML LisH_TPL Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_RIG_2nd Beta-prop_EIPR1 Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_Vps41 DUF7165 Beta-prop_VPS8 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_LRRK2 VPS8_N Beta-prop_HPS5 zf_topless Beta-prop_IFT122_2nd Beta-prop_IP5PC_F RMC1_N 7TMR-HDED
Other DBs
NCBI-GeneID: 115699723
NCBI-ProteinID: XP_030483116
UniProt: A0A803NMJ7
LinkDB
Position
X:80092767..80099141
AA seq 513 aa
MSTLEIEARDVIKIVLQFCKENSLHQTFQTLQSECQVSLNTVDSVETFVADINSGRWDAI
LPQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRLEH
LLVRTYFDPNEAYQESTKEKRRAQIAQALAAEVTVVPPSRLMALIGQSLKWQQHQGLLPP
GTQFDLFRGTAAMKQDVEDTYPSTLAHTIKFGTKSHAECARFSPDGQFLVSCSVDGFVEV
WDYISGKLKKDLQYQADETFMMHDDPVLCVDFSRDSEILASGSQDGKIKVWRIRTGQCLR
RLERAHSQGVTSVVFSRDGTQLLSTSFDSTARIHGLKSGKLLKEFRGHGSYVNDAIFTHD
GARVITASSDCTVKVWDMKTTECLQTFKPPPPLRGGDASVNSVHLFPKSTEHIIVCNKTS
SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNIYCFSYQSGKLEHLM
KVHEKDVIGITHHPHRNLVATYGEDCTMKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctactctagaaatcgaagctcgagatgtgatcaagattgtgcttcaattttgtaaa
gaaaattcgttgcatcaaacctttcagacactgcagagtgagtgtcaggtatctttgaac
actgtagacagtgttgaaacatttgttgctgatattaatagtggaagatgggatgcaata
ttgcctcaagttgctcaacttaaacttccaaggaataaattggaggacttgtatgagcag
attgttctggaaatgattgaacttcgggaattggatactgctcgtgctatcttaagacaa
actcaggtaatgggtgtcatgaagcaagaacaacctgaaagatacttgcgacttgagcat
ctcctagtcagaacttattttgatccgaatgaggcttatcaagagtcaacaaaagagaaa
cgacgtgcacaaattgctcaagcacttgcagcagaagttactgttgtaccaccttcaagg
ctaatggctcttattggtcagtcgttgaagtggcagcaacaccaagggttacttcctcca
ggcacacaatttgacttatttagaggaacagctgctatgaaacaagatgtagaagacaca
tacccatcaactcttgcacataccataaagtttgggacaaaaagtcatgcagaatgtgct
cgtttttccccagatggacagtttcttgtttcctgttctgttgatggatttgttgaggtc
tgggattatattagtgggaaactgaagaaggatttacagtatcaggcggatgaaactttc
atgatgcacgacgatccagtgctctgtgtggattttagtagggattcagagattcttgca
tctggatcacaagatggaaagatcaaagtttggcgtataagaactggtcaatgcttgcgt
cgtcttgaacgcgcgcattctcagggtgtcacaagtgttgtcttttctcgagatggaacc
cagttgctaagtacctcatttgatagcacagcaaggattcatggtcttaaatctgggaag
ttgttaaaggaattccgaggtcatggatcttatgtaaatgatgcaatctttacacatgat
ggagctcgtgttattactgcatctagtgattgcacggttaaagtgtgggatatgaagact
acagaatgtctgcagacattcaaaccacctcctcctctaaggggtggcgatgcgtctgtg
aattctgttcatcttttcccaaaaagtaccgaacacatcattgtatgcaacaagacctca
tctatatacatcatgactcttcaaggacaggttgtgaagagcttttcatcaggtaaaaga
gaaggtggagattttgtggcagcttgtgtttcacctaaaggtgaatggatttattgtgtt
ggtgaagacaggaatatatactgcttcagctaccaatctggtaaactagagcacctgatg
aaggtccatgagaaagatgtaattggtattactcatcacccccatagaaatttggtggcc
acatatggtgaggactgcacaatgaaattatggaagccttag

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