Cannabis sativa (hemp): 115699759
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Entry
115699759 CDS
T08987
Name
(RefSeq) ubiquitin receptor RAD23b isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03420
Nucleotide excision repair
csav04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115699759
09124 Replication and repair
03420 Nucleotide excision repair
115699759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
csav03051
]
115699759
03400 DNA repair and recombination proteins [BR:
csav03400
]
115699759
Proteasome [BR:
csav03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
115699759
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
115699759
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
CUE
TECR_N
UBA_3
Dsc3_N
Rad60-SLD_2
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
115699759
NCBI-ProteinID:
XP_030483159
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Position
8:15795926..15802612
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AA seq
386 aa
AA seq
DB search
MKLTVKTLKGSHFEIKVQPTDTIMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDETTLA
ENKVTEDGFLVVMLSKSKTLGSGSAGTASSTQPSSTNPSAAAPTSNSSAPAPVAAPAPAP
APDTATIPAPAPAPAEAPVQAPSVDTADTYGQAASNLVAGSNLEQTVQQLMDMGGGTWDR
ETVTRALRAAYNNPERAVDYLYSGIPEAAEVAVPAAHFPANQATETGGTTAPVSGAPNSS
PLNMFPQETLAGDGGGALGTLDFLRNNPQFQTLRSMVQSNPQILQPMLQELGKQNPQLLR
LIEENHAEFLQLINEPLEGSEGDLFDQPDQDMPHAINVTPAEQEAIERLEGMGFDRALVI
EAYLACDRNEELAANYLLENAADFED
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcactgtcaagactctcaagggcagtcatttcgaaatcaaggttcagcctacc
gatacgattatggctgttaagaagaacattgaagatatacaaggaaaggacaattaccca
tgtggacagcagttgctaatccacaatgggaaggtcttgaaagatgaaacgacactagcc
gagaacaaggttaccgaagatggttttcttgttgtcatgcttagcaagagtaaaacttta
ggctccggctcagctggcacggcttcttccacccagccatcttctacaaatccttctgca
gctgcaccaacctcaaattcttctgctcctgctcctgttgctgctccagctccagctcca
gcccctgatactgctacaattccagcccctgctcctgctcctgctgaagctccggtccaa
gccccgtcagttgatactgctgatacctatggccaagctgcttcaaatttggttgctggt
agtaatcttgagcaaactgtccaacaattaatggacatgggtggtggaacttgggacaga
gaaactgttactcgtgcacttcgagcagcatataacaatccagaacgcgcagtcgactat
ttgtactctggtattccagaagcagcagaagttgcagttccagcggctcatttccctgca
aatcaggcaactgaaactggtggaaccactgctccagtgtctggtgctcctaactcatct
ccattaaatatgttcccacaggaaacacttgctggtgatggtggtggagcacttggaact
cttgatttcctaaggaacaatccacagtttcagactttacgatcaatggtgcaatctaat
ccacaaattttacagcccatgcttcaggagcttggaaaacaaaacccccagcttttgaga
ttaatcgaggagaaccatgcagagttccttcagctaataaatgaaccccttgagggttct
gaaggtgacttatttgatcagcctgatcaagacatgccccatgccatcaatgtcacccca
gctgagcaggaagctatagaacggcttgagggaatgggatttgacagagctttagtcatt
gaagcatatttggcttgcgatcgtaatgaggaattggcagcaaattacctattggagaat
gctgcggattttgaggattga
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