Cannabis sativa (hemp): 115699976
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Entry
115699976 CDS
T08987
Name
(RefSeq) rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
115699976
Enzymes [BR:
csav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
115699976
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
115699976
NCBI-ProteinID:
XP_060958519
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Position
8:complement(20169503..20174443)
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AA seq
700 aa
AA seq
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MMMNFQRRSNGANSHHHVIINILIIIVFMSNTTHQSRDKLVTDTTIDQSANNDYSNLALQ
PVTLNILDKYIVLDNGIVQITLSKPEGSITGIKYNGVDNLLDVVNDEINRGYWDLVWIGN
GSTGKKGSLDRLQATDYKIILQNEEQIEISFTRTWNFSQEGKAVPLNFDKRYIILRGSSG
FYTYGTYEHLNGWPDFQLTNTRVALKLNRDKFKYMAIDDDRQRYMPIQLDRSPERGQALA
YPEAVKLVNPVEPQFKGEVDDKYQYSMENKDNRVHGWISTDPPMGFWQITPTDEFRSAGP
LKQCLASHVGPTTLAIFHSTHYSGADLIMEFNKNESWKKMYGPVFIHLNTLSKQGDPLHQ
LWQDAKKQMEVEVQSWPYNFPQSKEYPKSHQRGSLSGKLLLFDKYVSNFPISASGAFVGL
AAPGDAGSWQREAKGYQFWTETDKDGNFRINNIRVGNYSIYGWVPGFIGDYRDGNVVTIT
PGAHKEMGVLVYKPPRNGPTLWEIGTPDRSAAEFFVPDPNPDYVNKLYLNNTQKYRQYGL
WDRYTDLYPNNDLIYTVGLNDYREDWFFAQVARRSNNSTYTDTTWQIRFGLQNRTETQTY
ALRIALATAHISELQVRINKADEKIPLFTSGVIGKDNSIARHGIHGLYWLFNIEIPGSLF
VEGNNTIFLTRTNTTTPFQGIMYDYIRLEGPATASFTTHL
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgaattttcaaagaagatcaaatggggcaaatagtcatcatcatgtgattata
aacattcttattattatcgtatttatgagcaatactactcatcagtcacgtgataagctc
gtgaccgatacaacaatagatcaatcagcaaacaacgactactccaatcttgctcttcag
cccgtgacgttgaatatccttgataaatatattgtgttggacaacggcatagtgcaaata
acgctgtcaaaaccggaaggatcaatcaccggaataaaatataacggcgtcgataacttg
cttgatgtagtcaacgatgaaatcaacagagggtactgggaccttgtttggattgggaat
ggaagtacagggaaaaagggctctcttgataggctccaagcaacagattataagataata
ctccaaaatgaggagcaaatagagatttcattcaccagaacatggaatttctcacaagag
ggcaaggccgtcccattaaactttgacaaaagatacataatacttcggggttcgtctggc
ttctatacatatgggacatacgaacacttgaatggatggcctgatttccaactcaccaac
actcgagtagctcttaagctaaacagagacaagttcaagtatatggctatagatgatgat
aggcaaagatatatgccgattcaattagataggtcaccagaaagaggccaagccttggct
taccctgaggccgtcaaacttgtcaaccctgtcgagccacaattcaaaggagaagtggac
gacaagtatcaatattctatggaaaacaaagacaatcgggtacatgggtggatatccaca
gacccacctatgggtttttggcaaattactcccactgatgagttccgctccgctgggccc
ctcaaacagtgtctcgcttctcatgtcggccccaccacactcgccatttttcacagtacc
cattactcaggagcggatttgataatggaatttaataaaaatgagtcatggaagaagatg
tacggtcccgttttcattcatcttaataccttatcaaaacaaggtgacccacttcatcaa
ctctggcaggacgctaaaaaacagatggaagttgaagttcaaagctggccatataatttc
ccacaatcaaaggaatatccaaaatcacaccaacgtggcagcttaagtggcaaattacta
ctcttcgacaagtatgtgagtaattttcctataagtgcaagtggtgcgtttgtggggttg
gctgccccaggagatgccggatcttggcaaagagaagctaagggatatcaattttggacc
gaaacagacaaggatgggaattttcgtatcaataatataagagtgggaaactacagtatt
tatggatgggtgcctggttttattggtgattaccgtgatggtaatgttgttactattact
ccaggtgcacataaagagatgggagtacttgtgtataaacccccaagaaatgggccaaca
ttgtgggaaattggcactcctgaccgctctgctgcagagttctttgttcctgatcctaat
cctgattatgtcaacaaactctatctcaataacactcaaaagtataggcagtacggactt
tgggatagatacaccgatttatatccaaataacgacttgatttacactgttggtctcaac
gattaccgtgaagattggttttttgctcaagtcgccaggaggagtaataatagcacatat
acagatactacatggcaaataagatttggtcttcagaataggactgagacccaaacctat
gcattgcgcatagccctcgccaccgcacatatttccgaattacaagtaagaattaataaa
gcagatgagaagattccattatttacgagtggagtaataggaaaagacaacagtatagca
aggcatggaattcatgggctttattggctgttcaatatagagataccagggtcattgttt
gtggaagggaataacaccatttttcttaccagaacaaatacgaccaccccttttcaggga
atcatgtatgattatattcgtctagaaggccctgctactgcttcattcaccacccactta
taa
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