Cannabis sativa (hemp): 115699999
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Entry
115699999 CDS
T08987
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csav03041
]
115699999
Spliceosome [BR:
csav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115699999
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
115699999
NCBI-ProteinID:
XP_030483403
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Position
8:complement(49848913..49854544)
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AA seq
468 aa
AA seq
DB search
MSTSGTPQFRYTQTPSKVLHLRNLPWECTEEELIELCKPFGKIVNTKCNVGANRNQAFVE
FSDLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDVPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFSDAETASSARNALDGRSIPRYLL
PEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGISQPAVGPDGKKKEP
ESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAIFEKNGQTQALVQYPDISTAAVARE
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPEASLLAAQQAPGAPAAPPQW
QNPQYPGNEYGSAVQGHMPPGQGPWDPSMQAGRSTYVSAPGTFPGQNFATSSVPSYAAAG
VPSGSSPHASTRPSMPGAPPNMRHDGASPPGVRPGGVSPSGQPTYYGQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacctccggtacgccccagttcagatacacccaaaccccgtccaaagtcctccat
ctccgaaatcttccatgggagtgtaccgaagaggaactcatcgagctctgcaagcctttt
ggtaagattgttaataccaagtgcaatgtcggcgccaatcgcaaccaggctttcgttgaa
ttttcagacttaaatcaggccatttccatggtttcttattatgcttcatcttcggagcct
gcacaagttcgaggtaaaactgtatatatccagtactctaataggcatgaaattgtcaac
aacaagagtcctggagatgttcccggaaatgttctgttggtaaccattgaaggtgtagaa
gccggcgatgtgagcattgatgttattcacttggtgttctctgcttttggatttgtgcac
aagattgccacttttgaaaaggctgcaggttttcaggcattgattcagttcagtgatgcg
gagactgcatcttccgcaaggaatgcgttggatggaaggagcataccgaggtatctcctt
cctgagcatgttggttcatgccacttacgcatttcatattccgcccacactgatctaaat
ataaaatttcagtctcatcgtagcagggattatacgaatccgtaccttcctgtgaatcct
actgctattgagggtatttctcagcctgctgttggtcctgacggaaaaaagaaagagcca
gagagtaatgtgcttcttgcttcaatagagaacatgcagtatgctgttactgttgatgtt
attaacacagtgttttctgcatttggtacagtccagaaaattgcaatattcgaaaagaat
ggtcaaacacaggcattggtccagtaccctgatatcagtaccgcagcagttgccagagaa
gctttagaaggacattgcatttatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtaaaggcttacagtgacaagagtagagattatactattccg
gaagctagtctacttgccgcacaacaagctcctggtgcccctgccgcaccaccccagtgg
cagaatcctcagtaccctggtaacgaatatggtagtgctgtacaaggtcacatgcctccg
ggtcaaggaccatgggatccatctatgcaggctggaagatcaacttatgtctctgctcct
ggaacttttcctggccaaaattttgcaacatcctcggttccctcttatgcagcagcagga
gtgccttccggttcatctcctcatgcctctacaagaccgtctatgcctggagctccaccg
aacatgcgacatgatggtgcctcacctcctggggtgagacccggaggtgtttcaccttct
ggtcaacctacttactatggccaatag
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