Cannabis sativa (hemp): 115700128
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Entry
115700128 CDS
T08987
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00040
Pentose and glucuronate interconversions
csav01100
Metabolic pathways
Module
csav_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115700128
Enzymes [BR:
csav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
115700128
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
ADNP_N
Motif
Other DBs
NCBI-GeneID:
115700128
NCBI-ProteinID:
XP_060959317
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Position
8:complement(32281338..32283163)
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AA seq
376 aa
AA seq
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MGITFAVNPSIFDVRARPNTDIGEALSNAWKQACASPTQSELRIPKGTFKLKRATLNGPC
KAPIKINLQGTLQAPSDPAGFKDGDGWVTFERIDKLTLMGGGSFDGQGKGVWGKHCSQGQ
YCSKLPINVRFDYVTNSIIQDVISRDSKQFHINVLGGQNITFSRVRVDAPEDSANTDGIH
IGRSNGVNIIDSIIQTGDDCVSLGDGSKQITVRNVTCGPGHGFSIGSLGKYKDEKPVEGV
LFKGCTMKNTMNGVRIKTWPDSTDGLASNMHFEDINMENVGNPILIDQEYCPWNNCNKKV
PSKIKLSNVSFKNIHGTTTSSIAINLICSSGYPCQNVAVENIDLKYNGPEGRITSQCKNV
KPKTIGKQNPPPCIAI
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgggcattacttttgctgtgaatccttccatttttgatgtaagggcacgacctaatact
gatattggtgaagctctctccaatgcttggaaacaagcatgtgcatctcccacccaatct
gaattacgaattccaaaaggcacattcaagttaaaacgagcgacattaaacggaccatgt
aaggctccaattaagattaatctccaaggcacgttgcaagctccaagtgaccccgctggt
ttcaaagatggagatggatgggttacttttgaacgtattgacaaactaactttaatgggt
ggtggtagttttgatgggcaaggcaaaggagtgtggggcaagcattgctcccaaggacaa
tattgcagtaaacttcccattaatgtgagattcgactatgtcactaattcgataattcaa
gatgtaatatcacgtgatagcaaacaatttcatatcaatgtattgggtggccaaaacatt
acattttcacgtgttcgagtagatgctccagaagatagtgctaatactgatggaattcat
attggacgttcaaatggagtaaacatcattgactcaattattcaaacaggggatgattgt
gtttctttaggagatggtagtaaacaaataactgttagaaatgttacttgtggaccagga
catggttttagcattggaagtttgggaaaatataaagatgaaaaacctgtcgaaggagtc
cttttcaagggttgtacaatgaaaaatacaatgaatggtgttagaatcaaaacatggccc
gattctacagatggtttggcatcaaacatgcattttgaggatattaacatggaaaatgtt
ggcaatccaatcctcatagatcaagagtattgtccatggaacaattgcaacaaaaaggtt
ccgtcaaaaattaagctcagtaatgttagcttcaagaatattcatggtactactacatca
tcaattgcgataaacttaatttgtagcagtggatatccatgtcaaaatgtggcagttgag
aacatcgatctaaaatataatggaccagaaggtcgtattacgtctcaatgcaaaaatgtg
aagccaaagacaatcggcaaacaaaatcctcctccatgcattgcaatatga
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