Cannabis sativa (hemp): 115700129
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Entry
115700129 CDS
T08987
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00040
Pentose and glucuronate interconversions
csav01100
Metabolic pathways
Module
csav_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115700129
Enzymes [BR:
csav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
115700129
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GFIT
Motif
Pfam:
Glyco_hydro_28
Phage_Gp111
DUF4135
Motif
Other DBs
NCBI-GeneID:
115700129
NCBI-ProteinID:
XP_030483551
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Position
8:complement(32286255..32288470)
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AA seq
395 aa
AA seq
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MDLQRNTIDAIIALLVFLTVSVSVNCLTFDVTKYGGKPNSDISQALAVAWKDACAAPSSA
KIVIPKGLYKLRKGYFMGPCKSPIEFELEGTLQAPSTANGFQKGDGWVTFERINKLSVYG
SGTFDGQGKNSWGTQCARTNYCGQLPVNIRLNYVTNSVIKSVTSLNSKQFHYIVYGGENL
SFKNVKIIAPEDSWTTDGIHIGRSTNITVTDSIIKTGDDCISIGDGTKKLTITRVTCGPG
HGISVGSLGRYNNELPVQSIYVRDCTFKGSTNGVRIKTWQGSQDSIATDMHFENLMMYNV
QNPIIIDQEYCPWNTCNNVKEKPSRVKLSKVSFKNIRGTSATAVGVKLICGGYSCQNVEI
SGIDLKYNGNGPTKSVCKNVKPMVSGYVNPAVCKQ
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatctccaacgaaacacgattgatgcaatcatagctttgctagtatttttgacggtc
tcagtctccgtcaattgtctaacatttgatgtgaccaaatatggtggaaaacccaattct
gatatttctcaggctctagcagttgcttggaaagatgcttgtgcggcaccaagttcagct
aagatagtaattccaaaaggtttatacaaattaagaaaaggatatttcatgggaccatgc
aagtcacctattgagtttgagctggaaggaacattgcaggccccatccacagctaacggc
ttccaaaagggcgatggatgggttacttttgagcgcatcaacaagctatccgtgtacggt
agcggcactttcgacggtcaaggaaaaaatagttggggaactcagtgcgccaggactaac
tattgcggtcaactccccgttaatattaggttgaactatgtgacgaattcggtgatcaag
agtgtgacatccctaaacagcaagcaattccactatatagtttacggaggagagaatcta
tcgtttaaaaatgttaaaattatagcacccgaggatagttggaccactgatggaatccac
attgggcgttcaacaaacatcaccgtcaccgactcgatcattaaaacaggcgatgattgc
atctccatcggggatggaacaaagaaattgacaataacgagagttacatgtggacctggc
cacggaattagtgttggtagtcttggaaggtacaacaatgaactccctgtacaaagtatc
tatgtcagagactgtacattcaagggtagcacaaatggagttaggatcaagacatggcaa
ggttctcaggatagtattgcaacagatatgcactttgagaacctcatgatgtacaatgtt
cagaaccccatcatcatcgaccaagagtattgcccatggaacacgtgcaacaatgttaag
gagaagccatcaagagtgaagcttagcaaagtgagcttcaagaacatcaggggaacatcc
gcgactgctgttggagtgaagcttatttgcgggggatattcgtgccaaaatgtggaaatt
agtggcattgatctaaaatacaatggcaatgggcccactaagtccgtttgtaagaatgtg
aagcccatggtctctggctacgtgaacccagctgtttgcaaacagtaa
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