Cannabis sativa (hemp): 115700182
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Entry
115700182 CDS
T08987
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00900
Terpenoid backbone biosynthesis
csav01100
Metabolic pathways
csav01110
Biosynthesis of secondary metabolites
Module
csav_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
115700182
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csav01006
]
115700182
Enzymes [BR:
csav01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
115700182
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
115700182
2.5.1.29 geranylgeranyl diphosphate synthase
115700182
Prenyltransferases [BR:
csav01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
115700182
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
115700182
NCBI-ProteinID:
XP_030483625
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All DBs
Position
X:17554669..17556392
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AA seq
337 aa
AA seq
DB search
MAFSVLSSSSLLYLPLKPRKFILPIRCSSPQSISTQSKSTQFDLKTYWTTLIAEIDQKLD
EAIPVKYPEQIYHAMRYSVLAKGAKRSPPVMCVASCELFGADRLAAFPTACALEMVHAAS
LIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLGFRHIVSNTPSNLVPEPRVL
RVITEIARAVGSTGMAAGQFLDLEGGPNFVEFAQEKKFGEMGECSAVCGALLAGAEEDEI
ERLRRYGRAVGVLYQLVDDILEEKLKSKNGGVVEKKKGKSYVEVFGVEKAMEVAEELRAK
AKLELDGFEKYGESTLPLYSFVDYAADRGFKIGDSSS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcgttttcagtactatcatcctcttcccttctttacctcccattgaagcccagaaag
tttatcttaccaattcgatgttcttcaccacagtcgatttcaacccaatcaaagtcgacc
caattcgatttgaagacgtattggacgaccctcatagccgagattgaccaaaagctcgac
gaagcgattccggttaagtaccctgaacagatctaccatgccatgcgctactccgtcctc
gctaagggagccaaacgatctccgcctgtcatgtgcgtcgcctcctgtgaactcttcggc
gccgaccgcctcgccgctttccccactgcttgtgccctcgaaatggtacatgcagcttca
ttgatacatgatgatcttccttgtatggatgatgacccctcacgccgaggccagccctcc
aaccacacaatctacggcgtagacatggcgattcttgctggggatgctctcttcccgttg
ggatttcgccacattgtctctaacacaccttccaacctggtacccgagccccgggtcctc
cgcgtgatcactgagattgcgcgagctgttgggtctacaggcatggcagctgggcagttc
cttgacctggagggcgggccaaacttcgttgaattcgcgcaagaaaagaaattcggtgag
atgggtgagtgctcggctgtatgcggggcattactagctggtgcagaggaggatgagata
gagagactgaggaggtatggtagagctgtgggggttttgtatcagttggttgatgatatt
ctggaagagaaattaaaatccaagaatggtggggtagtggagaagaagaaaggtaagagc
tatgtggaagtttttggtgttgagaaggcaatggaagtagccgaagagcttagagctaag
gccaaactagagttggatggttttgagaaatatggtgagtctactttaccactttacagc
ttcgtggattatgctgctgatagaggttttaagattggagattcaagttcatag
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