Cannabis sativa (hemp): 115700311
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Entry
115700311 CDS
T08987
Name
(RefSeq) DNA-directed RNA polymerase subunit alpha-like
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115700311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csav03021
]
115700311
03400 DNA repair and recombination proteins [BR:
csav03400
]
115700311
Enzymes [BR:
csav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115700311
Transcription machinery [BR:
csav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
115700311
DNA repair and recombination proteins [BR:
csav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
115700311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S11
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-GeneID:
115700311
NCBI-ProteinID:
XP_060970839
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All DBs
Position
4:61796246..61804105
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AA seq
464 aa
AA seq
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MAKAIPRSGSRKNRHTGSRKNARRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG
FKGTRRGTPFAAQTAAGNAIRTVVDQGMQQAEVMIKGPGLGRDAALRAIRRSGILLSFIR
DVTPMPHNGCRPPKKRQKVIVSTRPLQWKCVESRADSKRLYYGRFILAPLMRGQADTIGI
VMRRALLGEIEGTCITRAKSDKIPHEYSNLVGIQESVHEILMNLKEIVLRSNLYGTREAS
ICVKGPGYVTAQDIILPSSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTPNNFQN
GSYPIDAIFMPVRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLLI
PFLHAEEENFHLENNQHKGTLPLFDFHGRVAKPRKTKKEIALKYIFIDQSELPPRVYNCL
KRSNIHTLLDLLNNSQEDLLKIKDFRIEDIKHILDILEIKKHFA
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagctataccaagaagtggttcacgtaagaatagacatacgggttcacgtaaa
aatgcacgtagaataccaaagggagttattcatgttcaagcaagtttcaacaatactatt
gtaactgttaccgatgtacgggggcgggtaatttcttggtcctccgccggtacttgtgga
ttcaagggtacaagaagagggacaccatttgccgctcaaaccgcagcaggaaatgctatt
cggacagtagtagatcaaggtatgcaacaagcagaagtcatgataaaaggcccgggtctc
ggaagagatgcggcattaagggctattcgtagaagtggtatactattaagtttcatacga
gatgtaacccctatgccacataatggctgtaggccccctaaaaaaaggcagaaagtaata
gtatctactcggccactacagtggaaatgtgttgaatcaagagcagacagtaagcgtctt
tattatggacgctttattctggctccacttatgagaggccaagccgatacaataggcatt
gtaatgcgaagagctttgcttggagaaatagaaggaacatgtatcacacgcgcaaaatcc
gataaaataccccatgaatattctaacctagtaggtattcaagaatccgtacatgaaatt
ttaatgaatttgaaagaaattgtattgagaagtaatctgtatggaacgcgcgaggcatca
atttgtgttaagggtcctggatatgtaactgctcaagatatcatcttaccatcttcggtg
gaaattgttgataatacacagcatatagctaacctaacagaaccaattaatttgtgtatt
gaattacaaattgagaggaatcgtggatatcgtataaaaacgccaaataactttcaaaac
ggaagttatcctatagatgctatattcatgcctgttcgaaatgcgaatcatagtattcat
tcttatgttaatggaaatgaaaaacaagaaatactttttctcgaaatatggacaaatgga
agtttaactcctaaagaagcacttcatgaggcctccagaaatttgattgatttattgatt
ccctttttacatgcagaagaagaaaacttccatttagaaaacaatcaacacaaaggcact
ttacccctttttgattttcatggtagagtggctaaaccaaggaaaacgaaaaaagaaata
gcattgaaatatatttttattgaccaatcagaattgccccccagggtctataattgtctc
aaaaggtccaatatccatacattattagaccttttgaataacagtcaagaagaccttctg
aaaattaaagattttcgcatagaagatataaaacatatattggacattctagaaataaaa
aagcatttcgcataa
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