Cannabis sativa (hemp): 115700317
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Entry
115700317 CDS
T08987
Name
(RefSeq) chaperone protein ClpC1, chloroplastic-like
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
csav03110
]
115700317
Chaperones and folding catalysts [BR:
csav03110
]
Heat shock proteins
HSP100
115700317
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
NBD_SMAX1
AAA_14
nSTAND3
Sigma54_activat
AAA_7
IstB_IS21
TniB
RuvB_N
NACHT
AAA_3
AAA_28
bpMoxR
AAA_18
TIP49
TsaE
Zeta_toxin
ResIII
AAA_23
DUF815
AAA_19
SLFN-g3_helicase
PhoH
DNA_pol3_delta2
Torsin
MazE_antitoxin
Motif
Other DBs
NCBI-GeneID:
115700317
NCBI-ProteinID:
XP_060959439
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Position
8:46039653..46041783
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AA seq
599 aa
AA seq
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MEKLYNKNEQQYHEIPTLQEYGSDLTKMAHEGKLEPLIGRKKEVESVVQILCKRRKNNPC
LIGDPGVGKTVIVEGLAQAIVNAQVPNKLQGNKVFSLEMGRLVAGTTNRGDCEERLMKIV
QEIENSKGTVILFIDELHTLIGAGRGGGGALDAANILKPALARGVLKCVGATTRDEYKKY
IEKDSALKRRFQAVEVPEPSVDDTIQILKGLLKKYESFHNVEYSKKAITAAARLSNQYIR
GRFLPDKAIDLIDQAGSRAQLHKTEVTTNGQVMVTEADIQHLISSWTGIPLENLSPSESN
KLLNMEKTLHKRIIGQDEAVDAISRAIRRARAGIRDPSRPMASFLFTGPTGVGKTELANA
LAVEYFGSKESIIRLDMSEYMSKHNYTRFIGSPPGYLGHDEGGQLTEAVLRRPHSLILFD
EIEKAHPDIFNTLLQILEDGRLTDGKGQTVDFKNTFIIMTSNIGNDVIVKGDQFDFGQVK
VAVAKELREKFRLEFLNRLDDVVVFKQLDDVQLKQIMDIMLKDVIERLERKNIFLEVTSE
FKEKLAKEGTAPTYGARPLKRAIVSLLEDCLAERILRGDIKEGDSVTVSVDEEGNIVAT
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggagaagctttataacaaaaacgagcagcaatatcacgagattccaactctccaggag
tatggttcagatttgaccaaaatggcccacgagggtaagctggagccattaattggaaga
aaaaaggaagtggaaagtgtggtgcagatactatgtaagagaaggaaaaataacccttgc
cttattggtgaccctggtgttgggaagactgtaattgtagaaggactggctcaggccatt
gttaatgctcaagtcccaaataaacttcagggcaataaggtattttcattggagatgggt
agacttgttgcgggtactactaatcgtggcgattgtgaggagaggttgatgaagattgtt
caagaaattgaaaatagtaaagggacagtaatcctcttcattgatgaacttcacactctt
attggagctggaagaggaggaggaggggctcttgatgctgctaacatcttgaaacctgct
cttgcaagaggtgtccttaagtgtgttggtgctactactcgggatgaatacaagaagtat
attgagaaagactcagctttaaaaagaagatttcaagcagttgaagttcctgaaccatca
gttgatgatacgatccaaatattgaaaggtttactgaagaaatatgagagctttcataac
gttgagtattcgaaaaaggctattactgctgctgctcgtttgtcaaaccagtacatcagg
ggtcggtttctccctgataaagcaatagacttgattgaccaagctggttcccgagctcaa
cttcacaaaacagaagtaactaccaatggtcaagtgatggttacagaggcagatattcaa
cacttgatttcatcctggacaggaattccattggagaatctatcaccctcagaatcaaac
aagttgctcaacatggagaaaacactacacaaacgaattataggacaggatgaagctgtt
gacgccattagccgtgccattcgtcgagctcgagctggaataagagaccccagccggcca
atggcaagcttcttattcacaggtccaaccggggttggcaaaactgagttggccaatgca
ttggctgttgagtattttggctccaaagagtccattataaggcttgacatgagtgagtac
atgtcaaagcataattatacaagatttattggatcacctcctggctatttaggccatgat
gaaggtggacagctgacagaagctgttctgcgcaggccacactctctgatcctctttgat
gagatcgaaaaggctcacccagacatttttaatactcttcttcagattttggaagatggc
aggctcacagatggtaaaggtcaaactgtggattttaaaaatacctttatcataatgacc
tcaaacattggcaacgatgtgattgttaaaggggaccagtttgattttggacaagtgaag
gtggcagttgcaaaggaacttagggaaaaattcaggcttgagttcttgaacaggcttgat
gatgtggtggtatttaagcaacttgatgatgttcagctgaaacagataatggatattatg
ctgaaagatgttattgaaagacttgaaagaaagaacattttcttggaggtaacatctgag
ttcaaagagaagttggcgaaagaggggactgctccaacctatggagcaaggccattgaaa
agagcaattgtgagtctcttagaagattgtttggctgagaggattctgagaggagacatt
aaagaaggggactcagtaactgtgagtgttgatgaggagggaaatatagtagcaacttaa
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