Cannabis sativa (hemp): 115700318
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Entry
115700318 CDS
T08987
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
csav03110
]
115700318
Chaperones and folding catalysts [BR:
csav03110
]
Heat shock proteins
HSP100
115700318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_22
Sigma54_activat
nSTAND3
TniB
NBD_SMAX1
Zeta_toxin
IstB_IS21
AAA_7
AAA_16
AAA_18
NACHT
TIP49
RNA_helicase
Mg_chelatase
SLFN-g3_helicase
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
115700318
NCBI-ProteinID:
XP_060959440
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All DBs
Position
8:46043971..46046160
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AA seq
593 aa
AA seq
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MSCLQQQQFYVPTLQQYGLDLTKMAQEVNPKXISVFXLDICIVEILCKRRKNNPCLIGDP
GVGKTVIAEGLAQAIVNAQVPNKLQGNKVFSLEIGRLVAGATYRGDCEERLVKIVQEVES
SKGRIILFIDELHTLIGAGGERGALDAANILKPALARGVLKCVGATTQDEYRKYIEKDSA
LKRRFQTVEVPEPSIEETIDILNGLQNKYESFHSVKYSQEVIVAAARLSNWYISDRFLPD
KAVDLIDHAGSRTQLQKTEVATKGQVMVTEADIQHLASTWTGIPLQKLSLSDSNKLLIME
ITLHKRILGQHEAVEVISCAIRRARAGIRDPSRPVASFLFTGSTGVGXTELADALAAEYF
GSKESIIRLDMSEYMEKHSSARLIGSPPGYIGHDEGGQLTEAVRRRPHSLILFDEIEKAH
TDIFKILLQILDDGRLTDGKGKTVDFKNTIIILTSNIGNNVILKGHQFGFGQVKMEVADE
LRKTFRPEFLNRLDDVVVFMQLESAQLKXIVNIMLKEVIQRLKEKNITLVVGFEVKEKLV
KEGNYPIYGARPLRRAIVSLLEDTLAERILRGDIKEGDAILVSLDNKGNVVVT
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtttacaacagcagcagttttatgttccaactcttcagcaatatggtttagat
ttgaccaaaatggcccaagaggtaaaccccaaatgaatttcagtattctaacttgatatt
tgcatagtggagatactatgcaagagaagaaaaaataacccttgccttattggtgaccca
ggtgttggaaagactgtaattgcagaaggcctagctcaggccattgttaatgctcaagtt
ccaaataaacttcagggcaataaggtattttctttggagattggtagacttgttgctggt
gctacatatcgtggcgactgtgaagagaggttggtgaagattgttcaagaagttgaaagt
agcaaagggagaataatcctcttcattgatgagcttcatactcttattggagctggagga
gaaagaggagctcttgatgctgctaacatcttgaaaccagctcttgcaagaggtgtcctt
aagtgtgttggtgctactactcaggatgaatataggaagtatattgaaaaagactcagct
ttgaaaagaaggtttcaaacagttgaagtacctgaaccatctattgaagaaacaatcgat
atattgaatggtttacaaaacaaatatgagagtttccatagtgttaagtattcgcaagag
gtgatagtggcagcggctcgtttgtcaaactggtacatcagtgatagatttctccctgat
aaagcagtagacttgattgaccatgctggttcccgaactcagcttcagaaaacagaagta
gctacaaaaggtcaagtgatggttacagaggcagatatccaacatttggcttcaacctgg
acaggaattccattgcaaaaactctcactatcagattcaaacaagttgcttatcatggaa
ataacattacacaaaagaattttaggacagcatgaagctgtggaggtcattagctgtgcc
attcgccgagctcgtgctggaataagagaccccagcaggccagtggcaagcttcttgttc
actggctcaactggggttggctaaacagaattggccgatgcattggcagctgagtatttc
gggtccaaagaatccattatcaggcttgacatgagtgagtacatggaaaaacatagttct
gcaaggcttattggatcacctcctggctatataggccatgatgaaggtggacaactgaca
gaagctgttcgtcgcaggccgcactctctgatcctctttgatgagattgaaaaggctcac
acagacatttttaaaattcttcttcagattttggatgacggcaggctcacagatggtaaa
ggtaaaactgtggattttaaaaatactattatcatattgacctcaaacattggcaacaat
gtaattcttaaagggcatcaatttggttttgggcaagtgaaaatggaagttgcagatgaa
ctgaggaaaacattcaggcccgagttcttgaataggcttgatgatgtggtggtatttatg
caacttgaatctgctcagctaaaatagatagtgaacataatgctgaaagaagttattcaa
agacttaaagaaaagaacattaccctggtagtggggtttgaggtcaaagagaagttggtt
aaagaaggaaattatccaatctatggggctagaccattgagaagagcaatagtgagtctc
ttagaagataccttggctgagaggattctgagaggagacattaaagaaggggatgcaatt
cttgttagtcttgacaacaagggaaatgtagtagtgacttaa
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