Cannabis sativa (hemp): 115700443
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Entry
115700443 CDS
T08987
Name
(RefSeq) protein argonaute 5-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115700443
03036 Chromosome and associated proteins [BR:
csav03036
]
115700443
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
115700443
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
115700443
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
115700443
microRNA pathway
RISC loading complex
115700443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoL1
ArgoN
ArgoL2
ArgoMid
Piwi_N
Motif
Other DBs
NCBI-GeneID:
115700443
NCBI-ProteinID:
XP_060959061
LinkDB
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Position
8:50807098..50812596
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AA seq
851 aa
AA seq
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MSSSPVDYSSKCVMFPARPGYGIVGRKCLIKANHFTLQLVTTIHNYKGLYHYHVWISPQV
TSMKLNRDIVKELGTLNYLGNVRVAYDGRNTIYSVGELPFSSNEFILKFPTTKTTTTTSE
CEFKVSIRFVSRIDLCNPQSFLHTIQPLNVALRSAPSEMYSVVGRSFYHDTMSRAGELGD
GVMYWKGFYQSLRPTQLGLSLNIDVSAKAFYEPIEVTDFIFKNFNVRYNSTPLDDHVRVQ
LRKNLRGVKVTCRHLDDTMLFKVFGVSTEPLNNLMFDLDGNTISVVTYFQDKYEIQLEYV
TWPALQVGSATKPIYLPIEVCRIVERQRCCKKLNQRQVTNLLRETCQRPYEREETIRQIF
RQNNYNDQNLVRDFGINVANDMTLINARVLPPPLLLYHDTGNEATANPQLGQWNMINKKM
INGGHVKSWTCVNFSHENPNIHNRFCDELVNMCISRGMAFQTAPVIPSRAWPANEIEEAL
KYVHDQCNMILGNKQLQLLIIILPDFSGSYGTIKRVCETELGIVSQCCRPKHAAKLNNKQ
YLENLSLKINTKVGGRNTVLSDALNKRIPFVSDVPTIIFGAAFTHPKPEDYSSPSIAAVV
ASMDWPEVTKYRALVSAQQHTEEIIQDLYKVTTDDKGSIVHGGMIRDHLIAFSRSTGAKP
HRIIFYRDGVSDGQFNRVLLYEMDAIRKACSSLEEEYLPRVTFVAIQKRCHTRLFPADYN
DRNSMDKSGNILPGTVVDTHICHPTQFDFYLKSHAGIQGTSRPAHYHVLFDENNFTADAL
QVLTNNLCYTYARCTKSVSIVPPAYYAHLAAIRARCYIGVAVDEEETDVGPRTYQPLQVI
NGNLKDVMFYV
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttctccggtggattattcatcgaaatgtgtgatgtttccggcaagacccggt
tatggtattgttggtagaaagtgtttgatcaaagctaatcacttcacactccaacttgtt
accaccatccataactataagggtctctatcattaccatgtatggataagtcctcaagta
acatccatgaaattaaacagagatatcgttaaagagttgggaactttgaactatttaggt
aatgtgagagttgcctatgatggtagaaatactatctactctgttggggagttaccattt
tcttcaaatgaatttattcttaagtttcccacaacaaaaacaacaacaaccaccagtgaa
tgtgagtttaaggttagcatcaggttcgtttcaaggatagacttatgtaatccacaaagc
tttttacacaccattcaaccacttaatgttgctctcagatcagctccatcagaaatgtat
agtgttgtgggaaggtctttttatcatgacacaatgagtagagctggtgagcttggagat
ggtgtaatgtattggaaaggtttctatcaaagtttgaggccaactcaattggggctttct
cttaacattgatgtgtcagcaaaggctttttatgaacctattgaggtaactgattttatc
ttcaaaaactttaatgtgagatacaattcgacgccattggatgatcatgttcgggttcag
ctaaggaaaaatttaagaggggttaaagtaacatgtagacatttggatgatacaatgttg
ttcaaagtttttggggtatcgacagagccattgaacaatttaatgtttgatcttgatggt
aacacgatttcggttgttacgtactttcaagacaagtacgaaattcagctcgaatatgtg
acatggcctgctctgcaagtaggaagtgcaacaaagccgatttacttgcccatagaggtt
tgtagaattgttgagaggcaaagatgctgcaagaaactcaaccaaaggcaagtaaccaat
ctattaagggaaacttgtcaacgaccgtacgaaagggaggaaaccattaggcaaattttt
cgacaaaacaattacaatgatcaaaatcttgttcgcgattttggaattaatgttgcaaac
gacatgacattgattaatgctcgagttttgcctccaccattgcttttataccatgatact
gggaatgaagctactgccaatcctcaactcggacaatggaatatgatcaataaaaaaatg
atcaatggtggccatgtaaaatcttggacttgtgtgaacttctcacatgaaaatccaaat
attcacaatcgcttttgtgatgaactagtcaatatgtgcatcagtagaggaatggctttc
caaaccgcgccagtaattccttcgcgcgcttggccagctaacgaaattgaggaggccttg
aaatatgttcatgaccaatgcaacatgatactcggaaacaaacaacttcagttgctaata
attatcttgcctgatttttcgggttcatatgggacaattaaacgagtttgtgaaactgag
ctaggaattgtttcacaatgctgccggcctaaacatgcagcgaagctcaacaacaagcaa
tacttggagaatctatcattgaaaatcaataccaaggttggtgggcgaaatacagtgtta
agtgatgctcttaataagagaattccttttgtgtctgatgtcccgacgataatctttggc
gcggcttttacacatccaaagcccgaagattactcaagcccttcaatagcagctgtggtt
gcctcgatggattggcccgaggtgaccaaatatagagcgttggtatcagcgcaacagcac
accgaggagatcatccaagatctttataaagtaactacagatgataaagggagcatagtc
catggaggaatgataagggatcatttaattgctttcagccgatcaaccggagccaaacct
caccggattatattctaccgagatggcgttagtgatggacagttcaatcgagtgttgctt
tacgaaatggatgcgataagaaaggcttgttcatcgctcgaggaagaatatcttcctcga
gtgacatttgttgctattcagaaaaggtgtcatactcgccttttccctgctgattacaac
gatcgcaattcaatggacaagagtggcaacattctaccaggcactgttgttgatactcat
atctgccacccaactcaattcgatttttacctcaaaagtcatgctggaattcagggaaca
agtcgtcctgctcactaccatgtcttgttcgacgagaacaacttcacagctgatgcctta
caagttctcacaaacaatctatgctacacgtatgcaaggtgcacgaaatcagtgtctatc
gttcctcctgcatattatgcacatttggctgcgattcgtgctcgttgctacattggagta
gcagttgatgaagaagaaactgatgttggcccaagaacttatcaaccccttcaggtgatc
aatgggaaccttaaagatgtgatgttctatgtctaa
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