Cannabis sativa (hemp): 115700443
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Entry
115700443 CDS
T08987
Name
(RefSeq) LOW QUALITY PROTEIN: protein argonaute 5-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115700443
03036 Chromosome and associated proteins [BR:
csav03036
]
115700443
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
115700443
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
115700443
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
115700443
microRNA pathway
RISC loading complex
115700443
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoL1
ArgoN
ArgoL2
ArgoMid
DUF3598_C
Motif
Other DBs
NCBI-GeneID:
115700443
NCBI-ProteinID:
XP_030483841
LinkDB
All DBs
Position
8:complement(64456956..64461731)
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AA seq
848 aa
AA seq
DB search
MSSSPVDYSSKCVMFPARPGYGIVGRKCLIKANHFTLQLVTTIHNYKGLYHYHVWISPQV
TSMKLNRDIVKELGTLNYLGNVRVAYDGRNTIYSVGELPFSSNEFILKFHNKTTTTTSEC
EFKVSIRFVSRIDLCNPQSFLHTIQPLNVALRSAPSEMYSVVGRSFYHDTMSRAGELGDG
VMYWKGFYQSLRPTQLGLSLNIDVSAKAFYEPIEVTDFIFKNFNVRYNSTPLDDHVRVQE
KFKRVKVTCRHLDDTMLFKVFGVSTEPLNNLMFDLDGNTISVVTYFQDKYEIQLEYVTWP
ALQVGSATKPIYLPIEVCRIVERQRCCKKLNQRQVTNLLRETCQRPYEREETIRQIFRQN
NYNDQNLVRDFGINVANDMTLINARVLPPPLLLYHDTGNEATANPQLGQWNMINKKMING
GHVKSWTCVNFSHENPNIHNRFCDELVNMCISRGMVGLSKPPVIPSRAWPANEIEEALKY
VHDQCNMILGNKQLQLLIVILPDFSGSYGTIKRVCETELGIVSQCCRPKHAAKLNNKQYL
ENLSLKINTKVGGRNTVLSDALNKRIPFVSDVDDNLWCGFTHPKPEDYSSPSIAAVVASM
DWPEVTKYRALVSAQQHTEEIIQDLYKVTTDDKGSIVHGGMIRDHLIAFSRSTGAKPHRI
IFYRDGVSDGQFNRVLLYEMDAIRKACSSLEEEYLPRVTFVAIQKRCHTRLFPADYNDRN
SMDKSGNILPGTVVDTHICHPTQFDFYLKSHAGIQGTSRPAHYHVLFDENNFTADALQVL
TNNLCYTYARCTKSVSIVPPAYYAHLAAIRARCYIGVAVDEEETDVGPRTYQPLQVINGN
LKDVMFYV
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttctccggtggattattcatcgaaatgtgtgatgtttccggcaagacccggt
tatggtattgttggtagaaagtgtttgatcaaagctaatcacttcacactccaacttgtt
accaccatccataactataagggtctctatcattaccatgtatggataagtcctcaagta
acatccatgaaattaaacagagatatcgttaaagagttgggaactttgaactatttaggt
aatgtgagagttgcctatgatggtagaaatactatctactctgttggggagttaccattt
tcttcaaatgaatttattcttaagtttcacaacaaaacaacaacaaccaccagtgaatgt
gagtttaaggttagcatcaggttcgtttcaaggatagacttatgtaatccacaaagcttt
ttacacaccattcaaccacttaatgttgctctcagatcagctccatcagaaatgtatagt
gttgtgggaaggtctttttatcatgacacaatgagtagagctggtgagcttggagatggt
gtaatgtattggaaaggtttctatcaaagtttgaggccaactcaattggggctttctctt
aacattgatgtgtcagcaaaggctttttatgaacctattgaggtaactgattttatcttc
aaaaactttaatgtgagatacaattcgacgccattggatgatcatgttcgggttcaggaa
aaatttaagagggttaaagtaacatgtagacatttggatgatacaatgttgttcaaagtt
tttggggtatcgacagagccattgaacaatttaatgtttgatcttgatggtaacacgatt
tcggttgttacgtactttcaagacaagtacgaaattcagctcgaatatgtgacatggcct
gctctgcaagtaggaagtgcaacaaagccgatttacttgcccatagaggtttgtagaatt
gttgagaggcaaagatgctgcaagaaactcaaccaaaggcaagtaaccaatctattaagg
gaaacttgtcaacgaccgtacgaaagggaggaaaccattaggcaaatttttcgacaaaac
aattacaatgatcaaaatcttgttcgcgattttggaattaatgttgcaaacgacatgaca
ttgattaatgctcgagttttgcctccaccattgcttttataccatgatactgggaatgaa
gctactgccaatcctcaactcggacaatggaatatgatcaataaaaaaatgatcaatggt
ggccatgtaaaatcttggacttgtgtgaacttctcacatgaaaatccaaatattcacaat
cgcttttgtgatgaactagtcaatatgtgcatcagtagaggaatggtagggctttccaaa
ccgccagtaattccttcgcgcgcttggccagctaacgaaattgaggaggccttgaaatat
gttcatgaccaatgcaacatgatacttggaaacaaacaacttcagttgctaatagttatc
ttgcctgatttttcgggttcttatgggacaattaaacgagtttgtgaaactgagctagga
attgtttcacaatgctgccggcctaaacatgcagcgaagctcaacaacaagcaatacttg
gagaatctatcattgaaaatcaataccaaggttggtgggcgaaatacagtgttaagtgat
gctcttaataagagaattccttttgtgtctgatgtcgacgataatctttggtgcggcttt
acacatccaaagccggaagattactcaagcccttcaatagcagctgtggttgcctcgatg
gattggcccgaggtgaccaaatatagagcgttggtatcagcgcaacagcacaccgaggag
atcatccaagatctttataaagtaactacagatgataaagggagcatagtccatggagga
atgataagggatcatttaattgctttcagccgatcaaccggagccaaacctcaccggatt
atattctaccgagatggcgttagtgatggacagttcaatcgagtgttgctttacgaaatg
gatgcgataagaaaggcttgttcatcgctcgaggaagaatatcttcctcgagtgacattt
gttgctattcagaaaaggtgtcatactcgccttttccctgctgattacaacgatcgcaat
tcaatggacaagagtggcaacattctaccaggcactgttgttgatactcatatctgccac
ccaactcaattcgatttttacctcaaaagtcatgctggaattcagggaacaagtcgtcct
gctcactaccatgtcttgttcgacgagaacaacttcacagctgatgccttacaagttctc
acaaacaatctatgctacacgtatgcaaggtgcacgaaatcagtgtctatcgttcctcct
gcatattatgcacatttggctgcgattcgtgctcgttgctacattggagtagcagttgat
gaagaagaaactgatgttggcccaagaacttatcaaccccttcaggtgatcaatgggaac
cttaaagatgtgatgttctatgtctaa
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