Cannabis sativa (hemp): 115700523
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Entry
115700523 CDS
T08987
Name
(RefSeq) rhomboid-like protein 20
KO
K25216
ubiquitin-associated domain-containing protein 2
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csav04121
]
115700523
Ubiquitin system [BR:
csav04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
115700523
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
UBA_7
Rhomboid
CUE
UBA_RAD5A
UBA_3
Motif
Other DBs
NCBI-GeneID:
115700523
NCBI-ProteinID:
XP_030483932
UniProt:
A0A803QPP2
LinkDB
All DBs
Position
8:24394178..24400021
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AA seq
290 aa
AA seq
DB search
MNGGPSGFNNAPVTRTFVIASALFTIFFGMQGRSNNLGLSYLDIFGKFRIWKLIVSAFAF
SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSLTVSLLLEVLALSFLKDPAKNLITS
GPYGLIFASFVPFFFDIPVSTRFTVFNVHFSDKSFIYLAGLQLLLSSWKRSILPGACGIL
AGILYRLNIFRIRKAKLPEFITSLFSRLSWPSAGNLPAAPSRGGNVPSFAGRPVERNYPP
SIPSAVEPSEDSIATLVSMGFDRNNARQALVQARNDVNVATNILLEAQSH
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcggtccatctggtttcaacaatgctccagtcacgaggacattcgttatcgcc
tctgctctcttcaccatcttttttgggatgcagggtcgctcaaataacctcggtttgtcg
tatctggatatttttggaaagttccgcatttggaagttgattgtgtcagcttttgccttt
tcatcgacaccggaactgatgtttggactgtatctactatattacttcagggtctttgag
agacagattggttccaataaatattcggtcttcattttgttttctctaacagtttcatta
ctgctagaggttcttgctctttcattccttaaagatcctgctaagaacctgatcacctcc
ggaccttatggccttatatttgcatcatttgtgcctttcttctttgatatcccagtttct
acacgctttactgtattcaatgtgcacttttctgataaatctttcatatacctagctggt
cttcagcttcttttatcatcatggaaacgttctatattgcctggggcttgtggcatcctt
gctggtatcttgtatcgcctgaatatctttcgcattcgcaaggcgaagctcccagagttt
attacttcgttgttttcaagactttcttggccatcagcggggaatttacctgctgctccg
agtagaggaggaaacgtaccatcatttgcaggtcgcccagtcgagagaaattatcctcct
tcaattccgtctgcagtagagccatcagaagactccattgctactctagtttctatgggt
tttgacaggaacaatgctaggcaggctcttgttcaggctcgaaacgatgtcaatgtggcc
acgaacatccttcttgaagcacagtcccattga
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