Cannabis sativa (hemp): 115700609
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Entry
115700609 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115700609 isoform X1
KO
K23288
syndetin
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csav04131
]
115700609
Membrane trafficking [BR:
csav04131
]
Protein recycling
Others
EARP complex
115700609
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
115700609
NCBI-ProteinID:
XP_030484075
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All DBs
Position
8:50499800..50514489
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AA seq
1124 aa
AA seq
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MQPNLFPFGTVLGNPFLFNGDLSEGFESSRVFFLVPFLLSQGGGMDLSKVGEKILSSVRS
ARSLGLLPSTSDRPEVPQRAAAAAAVARALAGLPPHQRYSLSSSSEELSSIYGSRPQSQV
VAELEEDFYEEEFDPISHILENVPSEENELEYFEKQATLRLAQLDRVSERLSRQVMEHHE
VMVKGMNLVREVEKDLKVANVICMNGRRHLNSSINEVSRDLVVNSHSKKKQAFLDIVPVL
TELRHALDMQAALESLVEDGDYCKAFQVLSEYLQLLDSFSELSAVQEMSRGVEGWLGRTL
QKLDSLLLGVCQEFNEQSYITVIDAYALIGDIAGLAEKIQSFFMQEVLSETHSVLKDTVQ
EDQEVHKQNNRLTYSDLCLRIPESMFRQSLLRTLAVLFRLMCSYNEIMGFQLENKDTASQ
TSNSVPRENDNSRNAGEVQKVGSASGNSSRFNGSLDQSVDRVSGSSSTIEATAVKSLSED
TRSTSSAHTSPNDSIVEDTKDDGATSTSGSPWYHLRKDATGFVSQTLQRGRKNLWQLTTS
RISVLLSSSAVSSASIHQFLKNYEDLNVFILAGEAFCGVEAVEFRQKLKIVCDNYFIAFH
RQNIHALKMVLERENWLVMPPDTVQAISFAGLVGDGAPLLASSDGKSGHSRSIFDKSVKS
VDTRSNKSGFSHWAISGNPFLTKLVHTSKEGHSNQFNGTVFTELGGHLNDNLFDEKVSPR
KSDSSQLNGTNSVLEEENEDLLADFIDEDSQLPSRISKPKVRRSHSSLKDDECVAQTGSS
ICVLRSMDKYARLMQKLKIINVEFFKGICQLFELFFHFVFETFGQQSNISAGKGSVDFIS
SRLKMALSRITQDCDQWIKPSSSTQTSLTPSYTHADVTPSPPNSNFGHAPGISFGLKERC
AGADTISLVARMLHRSKTHLQSMFLQSNTAVVEDFYTNLVDAVPDLIEHIHKTTARLLLH
INGYVDRITNAKWEVIDLGLEHNGYVDLLLGEFKHYKTRLTHGGIRKELQDLLSEYGIEI
IAETLVEGLSRVKRCTDQGRALMSLDLQVLINGLQHIVPVNVKPKFHIVETFIKAYYLPE
TEYVHWSRAHPEYTKNQIIGLVNLVATMKGWKRKTRLETIERIE
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccaatttgttccccttcggtactgttttaggtaacccctttctattcaatggc
gatttgagtgagggctttgagagctctagggttttctttttggttccctttctattgtca
caaggcggtggaatggatttatctaaggttggtgagaagattttgagctccgttaggtct
gctagatcgcttggtcttcttccttctacttccgatcgtcctgaggttcctcaacgagct
gcagctgctgcggctgttgctcgtgcccttgcaggtctgcccccacatcaaagatatagc
ctatcatcaagctctgaagaactaagctcgatatatggcagcagacctcagagtcaagtg
gtggcagagctagaagaagacttctatgaagaggaatttgatcccataagccatatttta
gagaatgttccgtctgaagaaaatgagctagagtactttgagaaacaggctaccctaaga
ttagcacaactggatagagtatcggaacggttgtctcgacaagttatggagcatcatgaa
gtaatggtgaagggtatgaatttggttagggaagtggagaaagacttaaaggttgcaaat
gtcatctgcatgaatggaagaaggcatcttaactcatctatcaatgaggtttcaagagat
ctcgttgtaaattcccattccaaaaagaagcaagcttttctggacatagttcctgtttta
actgagcttcgccatgcattggacatgcaagcagcacttgaatcacttgtcgaagacgga
gattactgcaaggcttttcaagttctatctgagtatttgcaactcttagatagtttctcc
gagctttcagctgtacaagagatgagccgtggagtagagggttggctgggaagaaccctt
caaaagttggattcacttttgttaggagtatgccaggagtttaatgaacagagctatatt
actgtgattgatgcttatgcacttattggtgatatcgccggtcttgctgagaagatacaa
agcttctttatgcaagaagttctctcagaaacccactctgtattgaaggatactgtgcaa
gaggatcaggaagtgcataaacaaaataatagactcacatacagtgatctttgccttcgg
atacctgaatctatgtttaggcagagtttgttgagaacactagctgtcctttttaggcta
atgtgctcctacaatgaaattatgggatttcagctggagaataaggatacagccagtcaa
acatcaaatagtgtgccaagggaaaatgataactctaggaatgcaggagaggtccagaaa
gttgggtctgcctctggaaattcctctagatttaatggctctcttgatcaatctgtagat
agagtttctggttcatcttctacaatagaagctacagctgtgaaatctttatctgaggat
actcggtctacaagttccgcacatacaagtccaaatgactccattgttgaagatacaaag
gatgatggggcaacatcaaccagtggatctccatggtatcatctccgaaaagatgctaca
ggatttgtttcacaaacccttcaaagaggacgcaagaatctttggcaactcacaactagt
cgaatatctgtcctgctttcttcttctgctgtttcttccgctagtatccaccaattcttg
aaaaattatgaagatctcaatgtcttcatcttggctggggaagcattttgtggagttgaa
gcagttgaatttagacaaaagctaaaaattgtgtgtgataattacttcatagcatttcac
cggcagaatatacacgcacttaaaatggttttggagagagaaaattggcttgtaatgcca
ccagatacagtacaggcaatcagctttgctgggcttgttggtgatggagcacctctactt
gcttcatctgatggcaaatccggtcactccagatctatttttgacaagtctgtcaaatca
gtagatactcgttcgaataagagtggattttctcactgggcaataagtggaaatccattt
ctgactaaactagttcatacttccaaagaaggtcactccaatcaatttaatggaacagtc
tttactgaacttggtggacatctaaatgataatctttttgatgagaaggtatctccacga
aagagcgactcaagccaattgaatggtactaattctgttttagaagaagaaaatgaagat
cttcttgcggactttattgatgaggatagtcaactcccaagtagaatttcaaagcctaaa
gttcgaagaagtcattcaagtttgaaggatgatgagtgtgtagcccaaacaggatcttct
atttgtgttcttcgatccatggataagtatgcaaggcttatgcagaagttaaaaataatc
aatgttgagttctttaaggggatatgccagctgttcgagttattttttcattttgtattt
gaaacgtttggtcaacaaagcaatatttcagctggaaaaggttcggttgacttcattagc
agtcgactgaagatggcattatctagaataacacaggattgtgaccagtggataaaaccc
tcatcctctacacaaacatctttgactccatcatatacacatgcggatgtcacaccaagt
ccccccaattcaaatttcggtcatgcaccaggaatatcttttggtctcaaggaaagatgt
gcaggtgctgacactatatctcttgttgctcgaatgttgcatagatctaaaactcatctc
caatctatgtttcttcaaagtaatactgctgttgttgaagatttctacacaaatttggtg
gatgctgtacctgatcttatagagcacatccacaagacaactgcaagactattacttcat
attaatggatatgttgatcggattactaatgcaaagtgggaagtaatagatcttgggctt
gagcataatgggtatgttgatttgctgttgggagagtttaagcactataagacgaggcta
actcatggcggaattcgcaaggagcttcaagacctcctttcagaatatggaattgaaata
atcgctgaaacactagttgaaggtctatcacgagtgaagagatgtactgatcaaggacga
gctctaatgtcattggatcttcaggtcttaatcaacggactccaacatatcgtcccggta
aatgtgaagcccaagtttcatatagtcgaaacctttattaaggcttactaccttcccgaa
accgaatatgtgcactggtcacgcgctcacccggaatacacaaaaaaccaaatcatagga
ctggtaaacttggttgccacaatgaaaggttggaagagaaaaacgagattggaaacaatc
gaaaggatcgagtga
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