Cannabis sativa (hemp): 115700870
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Entry
115700870 CDS
T08987
Name
(RefSeq) cyclic nucleotide-gated ion channel 18
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csav
Cannabis sativa (hemp)
Pathway
csav04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
115700870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csav04040
]
115700870
Ion channels [BR:
csav04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
115700870
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
GalA_N
IQ
Motif
Other DBs
NCBI-GeneID:
115700870
NCBI-ProteinID:
XP_030484394
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All DBs
Position
8:48194637..48199822
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AA seq
712 aa
AA seq
DB search
MNRIISTPASKFRHFRRQLGNKPGTEKATSVDEHPTHILWRYQILAPDSDIVGLWNHLFL
FTSLVALFIDPLYFFLPYIGGPACLSTDVDLGITITYFRSVFDLFFFLHMLMKFRTAFVA
PSSRVFGRGELVMDARQIAMRYLKSDFLIDLAAAIPLPQIFIWLVIPGTRNSRADHANNT
LALFVLIQYIPRLFLMFPLNQRIIKTTGVVTKTAWAGAAYNLVLYMLASHVLGASWYLLS
LGKQFSCWQTECTKESTSKLVPCIPSFLDCNSLQHPDRKFWLNVTRLTTKCDVSNDNAAF
KFGMFEDAYVNDVASSRFLEKYLYCLWWGLRNLSSYGTNLDTSRFIGETIFCILLCMIGL
ILFSHLIGNMQTYLQSMTVRLEEWRVKRRDTEEWMRHRQLPPDLQERVRRFVQYQWLATR
GVNEEFILRSLPLDLRREIQRHLCLALVRRVPFFSQMDDQLLDAICERLVSSLSIQGTYI
LQEDDPVNEMLFIIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALMPSSSMHLP
SSTRTVRALTEVEAFALRAEDLKFVSGQFKRMHSKKLQHAFRYYSHNWRTWGACFIQAAW
RRYKKRKMAKELAMHESSYYYNRNSGQEGEEEEGGIFEMSESETPLTGRASNAQNFGATI
LASKFAANTRRGVNQKVQATGPSTNASSTSLKMPKFLKPDEPDFSLYHEDDV
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaataatctcaaccccggcgtccaaattccgccattttcggcgccagctggga
aataaacccgggacggagaaagcgactagtgtggacgagcacccaacacacattctatgg
aggtaccaaatcttagcaccggacagcgacattgttggcctttggaaccacctctttctc
ttcaccagtttggtggctctgttcatagaccctctctatttcttcctcccttacatagga
ggcccagcttgcttgtccacagacgttgatttggggatcaccatcacctacttccgctct
gtcttcgacctcttcttcttcctccacatgctcatgaagttccgcaccgccttcgtcgct
cccagctctagagttttcggccgcggtgagcttgttatggacgcaagacagatcgccatg
cgctatttgaagtctgattttcttattgatcttgcagccgctattccattgccccagata
tttatttggttagtgattccggggacaagaaactcaagagcagatcatgcaaacaacact
ctagctctgttcgttctcattcaatacattcctagactttttctcatgttccctttgaac
caacgtattatcaaaactactggcgttgtaaccaaaacagcttgggctggcgcagcatac
aatcttgttctttacatgctagcaagtcatgtattaggagcttcgtggtacttgttatct
ttaggaaaacaattctcatgttggcaaacagagtgtactaaggaaagtacctcaaaactt
gtcccttgtatcccctcttttctagattgtaacagcttacaacaccctgatcgaaaattc
tggttgaacgttactcgtctaaccaccaaatgtgatgtatcaaatgataatgctgccttc
aagtttggaatgtttgaagatgcttatgttaatgatgttgcctcctcaaggtttcttgag
aagtacttgtattgtctttggtggggtttgagaaacttaagttcatacggaacgaatttg
gacacaagtagatttattggggagacaatcttttgcattcttttatgcatgattggtttg
attttgttctcacatttgattggaaacatgcagacatacttacaatcaatgacggtgaga
cttgaagaatggagagtgaagcgaagagatacagaggaatggatgaggcatcggcagtta
ccaccagatttgcaagagcgtgttcgtcgattcgtgcagtatcaatggcttgccacacga
ggtgtcaatgaggaattcatactccgttctttacctttggaccttcgtcgtgaaattcaa
cgccatttgtgtcttgcacttgttcgccgagtccccttcttttcacaaatggatgaccaa
cttctcgatgctatatgtgagcgtttagtgtcatcactgagtatccaaggcacttacata
cttcaagaagatgatcctgtaaatgagatgttgtttattatcagaggacaactcgagagc
tcaactactaatggtggtagatccgggtttttcaattccataactctaagaccaggagac
ttttgtggtgaagagttacttacttgggccttgatgccaagctctagtatgcacttacct
tcttccactagaacagttcgagcattgactgaggttgaagctttcgcgcttagagctgag
gatcttaagtttgtttcgggtcagttcaagcgaatgcacagcaagaaacttcaacatgct
ttcaggtattactctcacaattggagaacatggggtgcttgctttatacaagctgcttgg
agaaggtataagaaaaggaagatggcaaaggagctagctatgcatgagagctcttactac
tataaccgaaattcaggacaagagggtgaagaggaggagggtgggatatttgagatgagt
gaaagtgaaacacctttaactggcagagctagcaatgcccagaattttggtgccacaatt
ctggcttctaaatttgctgcaaataccagaagaggggttaaccagaaagttcaagccact
ggcccttctactaatgcttcttccactagcttaaagatgcctaagtttcttaagccagat
gagcctgatttctctttatatcatgaggatgatgtgtag
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