Cannabis sativa (hemp): 115701009
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Entry
115701009 CDS
T08987
Name
(RefSeq) chloride channel protein CLC-a
KO
K05016
chloride channel 7
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csav01009
]
115701009
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csav04131
]
115701009
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csav04040
]
115701009
Protein phosphatases and associated proteins [BR:
csav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115701009
Membrane trafficking [BR:
csav04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
115701009
Ion channels [BR:
csav04040
]
Chloride channels
Chloride channel (CLC)
115701009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
115701009
NCBI-ProteinID:
XP_030484555
LinkDB
All DBs
Position
8:46160373..46164627
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AA seq
781 aa
AA seq
DB search
MEQDSRLYGESTTEGDLEARESETNPLCQTLLKRNRTLSSNPLAIVGTKVSHIESLDYEI
NENDLFKQDWRSRSRVQVLQYVFLKWTFACLVGLLTGIIATLINLAVENIAGYKLLSVFA
YIEQDRYFMGLLYFTAANFFLTMVAAVLCVWFAPTAAGPGIPEIKAYLNGVDTPNMFGAT
QLIVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNYRIRWRWLRYFNNDRDR
RDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFIEIC
NNGQCGLFGRGGLIMFDVSNVPVTYHAMDIIPVVLIGVIGGLLGALYNHVLHKVLRLYNL
INQKGKIHKLLLSLGVSLFTSVCLYGLPFLASCTPCDASLAESVCPTNGRSGNYKQFNCP
KGYYNDLATLLLTTNDDAVRNIFSTNSAGEYNAISLLIFFVLYCVLGLITFGIAVPSGLF
LPIILMGSAYGRLLGMAMGSHTSIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLL
LLPITMIVLLISKTVGDSFNLSIYEIILELKGLPFLDANPEPWMRNLTVGELADAKPPVV
TLNGIEKVSRVVEVLRNTTHNGFPVLDDGVLRPVGSGIEVTELHGVILRTHLVQVLKKKW
FLTEKRKTEDWEVREKFTSVDLAEREGKIEEVTVTRDEMEMYIDLHPLTNTTPYTVVESM
SVAKAMVLFRSVGLRHMLIVPKYQATGVPPVVGILTRQDLRAHNILFAFPHLARSKSREK
P
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagattcaaggctctatggagaatcaacaacagaaggtgatttggaagctaga
gaatcagaaaccaatcctttatgccagactctgctcaaaagaaacagaacactttcttct
aatcctttagccattgttggcaccaaagtctctcatatagagagtttggattatgaaatc
aatgaaaatgatctgttcaagcaagactggagaagcagatccagagtacaagttcttcaa
tatgttttcttaaaatggacatttgcttgtcttgtggggcttcttactggaattatagcc
actcttatcaaccttgctgttgagaacattgctggttataaacttctttctgtgtttgct
tatatagaacaagacaggtactttatggggcttctgtatttcactgcagccaattttttt
ctaaccatggttgctgctgttctctgtgtttggtttgctccaactgctgctggtcctggt
attcctgagatcaaagcttatcttaatggagttgatactcctaacatgtttggtgctacc
caattgattgtcaagataattggaagcattggagctgtttcagctggattggatctagga
aaggaaggacctcttgtacacattggtagttgcatagcttcattgttaggacaaggaggg
cctgataattaccggattagatggcgatggcttaggtatttcaacaatgatcgcgatcga
agagacctcatcacttgtggttcttcctcaggggtttgtgcagccttccgttcgcctgtt
ggtggtgtacttttcgccttagaagaagtggctacatggtggagaagtgccttgttatgg
agaactttcttcagtacagcagtagtggttgtggttttgagggcattcattgaaatatgc
aataatggacaatgtgggctgtttggaaggggaggacttatcatgtttgatgtgagtaat
gttcctgttacttaccatgcaatggatattatacctgttgttctaattggtgtcattggt
ggacttttgggagccctttacaatcatgttcttcacaaggtccttaggctgtacaatctc
attaatcagaagggaaaaatccacaagctcctcctcagtcttggcgtatcactatttacc
tctgtgtgcctatatggtctgcctttccttgcctcttgcacaccttgtgatgcttcactt
gcagagtctgtttgccccacaaatggacgatcaggcaactataagcagttcaactgcccc
aaaggatactataatgatctagcaactctactccttaccaccaatgatgatgcagttcga
aacatcttttcgacaaactctgcaggcgaatataatgccatctcccttcttatcttcttt
gtactctattgtgttttaggactgattacctttggcattgctgtgccatccgggttgttt
ctccccattatcctcatgggatcagcttatggccgtttgcttggtatggcaatgggatct
cacacaagtattgatcaagggctctatgctgttcttggtgcagcttctctcatggctggt
tcaatgaggatgactgtttcgctttgtgtgatatttctcgaactaaccaacaatcttctt
ttactacccattaccatgattgtcctcttgatttcaaaaaccgtcggagatagtttcaat
ctaagcatttacgagattatactggagctgaaaggcctgcctttcttggatgcaaatcca
gaaccttggatgaggaatctcactgttggggagcttgctgatgcaaagccgccagtagtt
acactcaatggaattgaaaaggtatctcgggttgtagaagttctcagaaacactacacac
aatggtttccctgttttagatgatggtgtattacggcctgtgggatctggcattgaggta
accgaattgcatggagtaatcctcagaactcacctggtacaagtattgaaaaagaagtgg
tttctgacagagaaacggaaaacagaagattgggaagtgagagagaaatttacctcagtt
gatttggctgaaagggaaggaaaaattgaagaggtaacagttacaagggatgaaatggag
atgtacatagatctgcatcccctgacaaatacaacaccttacacagtggtagagagtatg
tctgtggcaaaagctatggtcctcttcagatcagtgggactccgccatatgctcattgta
ccaaagtatcaagcaactggggtgcctcctgtggttggcattttgacgaggcaggacttg
cgagcacacaacattttgtttgcttttcctcatctggcaagatctaagagcagagagaag
ccatga
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