Cannabis sativa (hemp): 115701214
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Entry
115701214 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115701214
KO
K10891
fanconi anemia group D2 protein
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
115701214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csav03400
]
115701214
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
115701214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FancD2
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
115701214
NCBI-ProteinID:
XP_030484806
LinkDB
All DBs
Position
8:34730898..34743748
Genome browser
AA seq
1501 aa
AA seq
DB search
MVFLKKQTTPRKRPSSSSFVSPFPPPKIPKSTATADAPPPNNAAEVPVTDKMVSILAEAG
CTLINPSGPPCLPTDHNKLRRHLHHAFSFSDNASALRSDFLAGLSSYIQSPKNLHRILKP
SRSDGLGPTGESLVRHLLLVPSIQLDLQNMLLEKLPEYFHVYSEHSESSSLSLENDVARL
IVNHFRWLDFIVDPNAFTEKLMQVLSICPLHLKKEIIGSLPEIIGDQSNKTVVESLELIL
QEDSSIVVAVLDSFSNLNLDEELQEQVITIALSCIRTIDVEHMPFLLRFLLLSATAANVG
RIISQIREQLKFVGLSNACAMQQKKLKGKSHKDSSEALILDALRSSLRFKNMLCQEILKE
LNSLHKPRDHKVIDIWLLMLIYMNGELLQKRVEKIFKKKIVEDCIHQAMFDQCIGGLKDL
VKEYLPSFISLTEYLLACKEKKAREFGISVYTSMFKEFVDSYSRQEVLGSLVTLVGSGVS
YVVSSALETLGFLASKNAQELIPFSPHISGILDYLEGFNVENLHKVYEVFSQLALFARSS
ADSYRSSFANELLMIVRKQVGHTDLKYKKMGLIGTLKIVSCLGDAKNATSPSLSQKSNSE
EALELLKMSLDSCKQLPLSLVMFYDELTELMDSEALHPTITEWVGKHVGEFESMYLSDLD
GGQLPNKETYCGLEGELWMNLDGDISPICLNILPLVSASLQSTSLQVLPANFLLLSTIER
LTNQGSLGGIDALLGCPLHLPSSKYFLGTGWKSLSGKQKQTVCLSLYYAANWIRELLNAF
CTQIAGGFEFTSQTTKEDIITKLLKRLRNLVFLEGLLNHYIGRYTLSLPELHIYLDHSGS
SLLNPQSHQVKHVEKKREHNKTNVEIPSDKKRTRKNLSKACTSSDSNEKLRQPTIIDVYR
KAGAITSQDMPNETSSGLSSKERSTESSEQRPHDSNEPVVVDISSVAKALEGQRSKFRCL
LVQCFSILTLSKGQDSCCSDPAAELPLYLYLLRDLHYKLDYFSPRKLFSGRVFSAPVGFT
RMTISQFLSKITPVFPFLKRHLDSAICLLKEGDENCQEHWKTQFTFAGNPDIPIFELSKS
SMSTMVFKEILHCFREIINLPDILMNKEILLYLLEAFQLGKIPEHFFSSMQLTLLPGTAE
YLYVGAYLFVESVLDEACCFSFMLASESILTLELIVTSFRKFLDKLREENGNQMHSGIQG
ALDLLRTKLGSSAEKLLKHNWESEHLENGWKNKGEMVQKILHIYLESSDSTSALLDEIAQ
SILTQELVSENAEEENNPGFSTLNSTTFIVWYRVLHERNMTVLNRLVKEVIFLAKSRASA
QHETIIELLANLQHSVNVVVSLVSLCRTSNKMTVHAMAVKYGGKFVDSFLKVFDFLRAQF
EGHKECIIQMVKELQKATRTIQTLCSEAKGLKQTVITSKIPATKRSMERYLFHVKALLYT
TPSGCKFWMGNLKHKDLTGQIVSSQAYVDDPGDSDTLDPTEAVNKNTPISAASEDEAETE
R
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atggtattcctcaaaaaacaaactactcctcgcaaaagaccctcctcctcctccttcgtc
tcccctttccctcctcccaaaatccccaaatccaccgccactgccgatgctcccccacca
aacaacgccgctgaagtccccgtcaccgacaagatggtctcaattctcgccgaggctggt
tgtactctcatcaacccctccggccccccatgtcttccaaccgaccacaacaagctccgt
cgccaccttcatcatgccttctcattttctgataatgcctctgctcttcgttccgatttt
ctcgcaggcctttcgtcctacattcaatccccgaaaaatctccacaggattcttaagcct
tcgagaagtgatggattaggtccaactggggagagcttagtcaggcatttgttgctggtt
ccatccattcagttagaccttcagaacatgcttcttgagaaacttccggagtactttcat
gtgtattcggaacattctgaatcgtcatcgttgtcgcttgaaaatgacgtggccaggctt
atcgttaaccacttccggtggcttgacttcattgttgatcctaacgccttcaccgagaag
ttaatgcaagttctttcgatttgccctctgcatttgaagaaagagattatcgggtcgttg
ccggagattatcggtgatcagagcaataaaactgtggttgaatcgcttgagctaatactt
caagaggactcctctatagttgtcgctgtgctcgactcattttcaaaccttaatttagat
gaagagttacaggaacaggtgatcaccatagcattatcttgcatcagaactattgatgtg
gaacacatgccgtttctactcagatttctgttgctgtcagcaacagcagcaaatgtagga
agaataatttctcagattcgagaacagttgaagtttgttgggctgtcaaatgcttgtgca
atgcaacagaaaaagttgaaaggaaagtcacacaaggacagttcggaggctttgattctt
gatgccttgagatcaagtcttcgattcaagaatatgctttgccaggagattttgaaagaa
ctgaattcccttcacaaacctcgagatcacaaagtcattgatatttggctgcttatgctc
atatacatgaatggtgagttgctgcaaaagagagtagaaaagatattcaagaagaaaatc
gttgaagattgcattcatcaagctatgtttgatcaatgtattggtggactcaaggatttg
gtaaaggagtatcttccatcatttatttctctgactgagtatctcctggcgtgtaaagag
aaaaaagcaagagagtttggcatctctgtctatactagtatgttcaaagaatttgttgat
tcgtattcgaggcaagaagttcttggttcactagttactcttgtgggatctggtgttagc
tatgtagtgagttctgctttggaaaccttgggtttcctggcctccaaaaacgcacaggaa
ttgattcctttttctcctcatattagtggtatactggactacttggagggatttaatgtt
gaaaatctgcacaaggtctatgaggttttcagccaactggcactatttgcccggtctagt
gcagattcatatagatcctcttttgctaatgaacttttgatgatagtcaggaaacaggtt
ggtcatacagatcttaagtataagaagatgggtctaatcggcaccctgaagatagtttcc
tgtcttggtgatgcaaagaatgctacctctccatccttatctcagaaatcaaatagcgag
gaagcgttggaactcttgaagatgtctttggactcttgtaaacaattgcccttatctttg
gtcatgttttatgatgaactgacagagctgatggactctgaagctcttcatccaaccatt
acagaatgggttgggaaacatgtaggtgaatttgaatctatgtatctatctgatcttgat
ggtggacagttgcctaataaggagacttattgtggtttagaaggggaactctggatgaac
ttggatggtgatatttcacctatttgtcttaacatattgccattggtttctgcatccttg
cagtctacatctttacaagtccttcctgcaaacttccttttactgtctactattgagagg
ttgacaaatcaaggatctcttggaggaattgacgcactacttggctgtcccttgcatctt
ccatcctcaaagtactttcttggaactggctggaagtctctgtctggtaaacaaaaacag
actgtttgtctctccctctattatgcagcaaactggatacgtgaattactcaatgctttt
tgtacacaaattgctggaggatttgaatttactagccagactacaaaagaggacataatt
acaaagctactgaagcgattgaggaatcttgtatttcttgagggattattgaaccattat
attggtcgttacactttatctctgcctgagctccatatttacttggatcactctggctct
tcactgttaaatccacaatcacaccaagtaaagcatgtggaaaagaaaagggagcataat
aaaactaatgttgaaattccttctgacaagaagaggacacgtaagaatctctcaaaagca
tgcacaagttcagattcaaatgagaaactacggcaacccactattattgatgtttatagg
aaagcaggagctataacaagccaagatatgccaaatgaaacttcttctggtttatcttct
aaagagaggtcaactgagtcatcagagcagcgacctcatgactctaatgagcctgttgtt
gtagacatttcttcagttgcaaaggctcttgaaggccagcgatccaaattcaggtgtctc
ctggttcaatgcttttccattttgactctttcaaagggtcaagattcttgttgctctgat
cccgctgctgagttaccactatatctgtaccttctgcgtgatcttcattacaagctggat
tacttctcccccagaaaactattctccggtagagtttttagtgctccagttgggttcacc
aggatgacaatcagtcaatttttgagcaaaattacaccagtgtttccatttcttaagaga
catttggatagtgcgatttgtctacttaaagaaggtgatgaaaactgtcaagaacattgg
aagactcaatttacttttgctgggaacccagatattccaattttcgaactttcaaaatct
tcaatgtctactatggtattcaaagaaatacttcattgttttcgtgagataataaacttg
ccagatatactgatgaataaagaaattcttttataccttcttgaagccttccagcttggc
aagataccagaacatttcttttcgagcatgcaattgacacttctccctgggacagctgaa
tacttatatgttggggcttatttatttgttgaaagtgtcctcgacgaagcatgctgtttc
tcctttatgctagcctccgagtctattcttactctagaattaattgttacctcattccgg
aaattccttgataagctcagggaggaaaatggtaatcaaatgcattcaggaatccagggg
gcacttgatttattaaggaccaaacttggcagttctgctgagaagcttttgaagcataat
tgggagagtgaacatcttgagaacggttggaagaacaaaggtgaaatggtacaaaagata
cttcacatttacttggaaagtagcgattccacttctgctctgctagatgagatagctcaa
tctattttaacacaggaacttgtatctgaaaatgcagaagaagaaaataatccgggtttt
tcgactttaaattccacaacattcattgtatggtacagggtactgcacgaaaggaatatg
actgttcttaacagattggttaaggaagtcattttccttgctaaatctagagcttctgct
caacatgaaaccatcatagaactattggccaacctacaacattctgtaaatgtggtggta
tcgttagtttccctttgcaggacgtctaacaagatgactgtgcacgctatggctgttaaa
tatggtgggaaatttgttgattccttcttgaaagtttttgatttcttgcgagctcaattt
gaaggtcataaggagtgcataatccaaatggtgaaagagcttcagaaggccacaagaact
atacagaccctttgttcagaggcaaaaggtttgaaacaaactgtcataacgagcaaaatt
ccagcaacgaaaaggtctatggaacgctatttgttccatgtcaaggctcttctatataca
acacccagtgggtgcaaattttggatgggaaacctaaaacataaagacttaacgggacag
atagtgagttcacaagcatatgtggatgatccaggtgacagtgacacattagatccaaca
gaagctgttaacaaaaatacacctatcagtgctgctagtgaagatgaagccgaaactgaa
cgataa
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