Cannabis sativa (hemp): 115701237
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Entry
115701237 CDS
T08987
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00906
Carotenoid biosynthesis
csav01100
Metabolic pathways
csav01110
Biosynthesis of secondary metabolites
Module
csav_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
115701237
Enzymes [BR:
csav01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
115701237
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
HI0933_like
GIDA
GDI
Thi4
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
115701237
NCBI-ProteinID:
XP_030484845
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Position
8:19764814..19769982
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AA seq
680 aa
AA seq
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MAELSSFSITPINSSRFPTNHHSSPKLSTLKLTSQNQKCDKLLVFSDYDPLCYLKSGFVN
PKNSSHLYGVELGGSGTRPRSQKCKNFSIGCSKFSVFSNYKLTGTGPRFHHSTNEMGAIR
GITSAGSSDRNNNKKNKFISNSTSALNMDKAVEKNKGGGDNYYDAIVIGSGIGGLVAATQ
LAVKGARVLVLEKYVIPGGSSGYYQRNGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCE
MPVIPDPTTVHFHLPNNLSVLVHKEYSEFIAELTSKFPHEKEGIFKFYGVCWKIFNALNS
LELKSLEEPIYLFGQFFQKPVECLTLAYYLPQNAGDIARKYIKDPELLSFIDAECFIVST
VNALQTPMINAGMVLCDRHYGGINYPIGGVGGIAESLAKGLIDQGSEILYKANVTEIVID
QGQAVGVRMSDKREFFAKTVISNATRWDTFGKLLKGKDLPKEEENFQKAYVKAPSFLSIH
MGVKAEVLPPDTDCHHFVLENDWTRLEKPYGSIFLSIPTVLDSSLAPEGRHILHIFTTSS
IEDWEGLSPKEYVEKKELVANEIISRLEKKLFPGLASSIDFIEVGTPKTHRRYLARDNGT
YGPMPRGTPKGLLGMPFNTTAIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEK
KSPLLDAALLRTLSWLRSLA
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattaagctccttctcaataactcctatcaattcttctcgctttcccactaac
caccatagttccccaaagttgagcactttaaaactcacaagtcaaaatcaaaagtgtgat
aaactccttgttttcagtgattacgacccgctttgctatttgaaatctgggtttgttaac
cccaagaattcttctcatttgtatggtgttgaattgggtggaagtggaaccagacccaga
agccaaaaatgtaaaaatttctcaattgggtgttctaaattctcagtcttcagtaattac
aagctcactggtacagggccaaggtttcatcacagtacaaatgagatgggggctatcaga
ggcataacctcagcgggaagttcagatagaaataataataagaagaataaattcatttca
aattctacttcagcactgaatatggataaagctgtggagaaaaacaaagggggtggtgat
aattactatgatgccattgttattgggtcaggaataggaggcttggtggcagccacccaa
ctggcagtgaagggtgcccgggttttggttttggaaaagtatgtgattcctggtgggagt
tctggatattaccagagaaatggttatacttttgatgttggttcttctgtgatgttcggt
ttcagtgataagggtaatctaaatttaattacacaagcattggcagcagttggttgtgaa
atgccagtgatacctgatccaacaacagtccatttccatctgcccaacaacctttctgtg
ctagttcataaagagtacagtgaattcatagcggaacttactagtaaatttccccatgaa
aaggaaggaatcttcaaattctatggcgtatgctggaagatcttcaatgccttaaactca
ctggaactaaagtcacttgaggagccaatctatcttttcgggcagtttttccagaagcct
gttgagtgcttgacacttgcctactatttgcctcaaaatgctggagatatagctaggaag
tatattaaagatcctgagttgttgtctttcatagatgcagagtgttttatagtaagcacg
gtcaatgctttgcaaacaccaatgataaatgcaggcatggttttgtgtgacaggcactat
ggtggaattaactaccctattggtggtgttggtggaatagcagagtcattagctaaaggt
ctcattgaccaaggaagtgagatactctacaaggcaaatgtgactgaaattgtaattgac
caaggccaggctgtgggagtaaggatgtcagataaacgtgaattctttgccaaaacagta
atatcaaatgctactcgatgggatacctttgggaagcttttgaaaggaaaagaccttcca
aaggaagaggaaaattttcaaaaagcttatgtgaaggccccatcttttctttccattcac
atgggagttaaagctgaggttctaccaccagatacagattgccatcactttgttctcgag
aatgattggactagacttgagaagccgtatggaagcatttttttaagtattcctactgtt
ctcgattcatcacttgcaccagaagggcgccatattcttcacatatttacaacctcttcc
attgaagattgggagggactctctccaaaagaatatgtggaaaagaaggagcttgtggca
aatgaaatcattagcagattagagaagaaactatttccaggactagcatcttccattgat
tttatagaggtggggacaccaaagacacacagacgatacctagctcgtgataacggcact
tatggaccaatgcctcgtggaactccgaaaggcttgctaggaatgccgttcaatacaaca
gcaatagatggtctatactgtgttggtgatagctgctttcccggacaaggcgtaatagct
gtagccttctcaggagtaatgtgtgctcaccgtgtagctgctgatattgggcttgagaaa
aagtctcccctattggatgccgccctccttcgaactcttagttggctgaggtcactggct
tga
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