Cannabis sativa (hemp): 115701405
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Entry
115701405 CDS
T08987
Name
(RefSeq) probable pectate lyase P18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00040
Pentose and glucuronate interconversions
csav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115701405
Enzymes [BR:
csav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115701405
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Phage_Gp84
Motif
Other DBs
NCBI-GeneID:
115701405
NCBI-ProteinID:
XP_030485051
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Position
8:46798848..46800957
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AA seq
406 aa
AA seq
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MAKLSTLLILFLLSFLISATSLSLASIQDPELVVQEVHRSINASRRNLGYLSCGTGNPID
DCWRCDPNWEKNRQRLADCAIGFGKDAIGGKNGRIYVVTDSGNDDPVNPRPGTLRHAVIQ
DEPLWIIFKRDMVIKLEKELVMNSFKTIDGRGASVHVAGGACITIHYVSNVIIHGIHIHD
CKPGSSGDIRNSPEHSGYWRVSDGDGVSIFDSQHVWVDHCSLSNCKDGLIDAIHGSTAIT
ISNNYFTHHDKVMLLGHSDSYTRDKNMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYT
HWEMYAIGGSASPTINSQGNRFLAPNERFKKEVTKHEDAPESEWSRWNWRSEGDLFLNGA
FFRQTGAGAASSTYARASSLSARPSSLVGSITVASGALNCRKGSRC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggccaaactttcaactttgcttatcttatttctcttatcttttctaatatcagctact
tcactatctcttgcttcaattcaagaccctgaacttgttgtacaagaagtacaccggagt
atcaatgcttctagaagaaacttggggtatttatcatgtgggacaggaaaccccattgat
gattgttggagatgtgatcctaactgggagaagaatcgccaacgcttagccgactgcgca
atagggttcggtaaagacgccattggaggcaaaaacggaagaatctacgtggttacagac
tcaggcaacgacgacccggtaaaccctagaccgggaacactcagacatgcggttatacaa
gacgagccgttgtggatcatattcaagagagacatggtgataaaactcgagaaagagctc
gtgatgaactctttcaagacgatagacggccgtggagcgagcgtccacgtggccggcggt
gcatgcataacgatccattacgtgtctaacgtgattattcatgggattcatatccatgat
tgtaaacctgggagtagtggtgatattagaaactctcctgaacattctgggtattggaga
gtttcggatggtgatggtgtttctatatttgattcacaacatgtttgggttgatcattgc
tcgctttcgaattgtaaagatgggcttattgatgctattcatggttcaactgctattact
atttcgaataattattttactcatcatgataaggttatgcttttgggacatagtgattcc
tatactcgtgataagaatatgcaggttactgttgcttttaatcattttggtgaaggcctt
gtccaaagaatgccaaggtgtagacatggttatttccatgtagtgaacaatgactacact
cactgggaaatgtatgccattggtggtagtgcgtccccaactatcaatagccaagggaac
aggttcttggcaccgaacgagcggttcaagaaggaggtaacaaaacacgaggatgcccca
gagagcgagtggagccggtggaactggcggtctgaaggcgatcttttcctcaatggagct
ttctttcgccagactggggccggtgcagcctcctcaacctatgctagggcttcaagtctt
agtgctaggccttcttcccttgtgggctccattactgttgcttctggagccctcaattgt
aggaagggatcccgttgctga
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