Cannabis sativa (hemp): 115702062
Help
Entry
115702062 CDS
T08987
Name
(RefSeq) valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115702062
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csav01007
]
115702062
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csav03016
]
115702062
Enzymes [BR:
csav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
115702062
Amino acid related enzymes [BR:
csav01007
]
Aminoacyl-tRNA synthetase
Class I (U)
115702062
Transfer RNA biogenesis [BR:
csav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
115702062
Prokaryotic type
115702062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
EFG_C
Motif
Other DBs
NCBI-GeneID:
115702062
NCBI-ProteinID:
XP_030485370
LinkDB
All DBs
Position
9:complement(38177291..38196540)
Genome browser
AA seq
968 aa
AA seq
DB search
MIIQTAFSAPSLWSSCSAYRFNLNPLLFSKTRRRSPWHFTRLSSRLFAVAASANGTFTSP
EIAKSFDFTSEERIYNWWDSQGYFKPNFDRGGDPFVISMPPPNVTGSLHMGHAMFVTLED
IMVRYNRMKGRPTLWIPGTDHAGIATQLVVERMLASEGIKRVEMSRDDFTKRVWEWKEKY
GGTITNQIKRLGASCDWSREHFTLDEQLSGAVIEAFVRLHDKGLIYQGTYMVNWSPSLQT
AVSDLEVEYHEEKGILYYMKYRVAGGSSSDYLTIATTRPETLFGDVAVAVHPKDGRYSKY
IGKMAIVPMTYGRHVPIIADMLVDKDFGTGVLKISPGHDHNDYNIAKKLGLPILNVMNKD
GTLNNVAGLYCGLDRFEARKKLWSDLEETGLAVKKEPHTLRVPRSQRGGEVIEPLVSRQW
FVTMEPLADNALQAVEKGDIKIIPERFEKIYNHWLLNIKDWCISRQLWWGHRIPVWYIEG
KDNEEEYIVARNADEALKKAQEKYGKAVKIYQDPDVLDTWFSSALWPFSTLGWPDVSSED
FKQLYPTTVLETGHDILFFWVARMIMMGIEFTGRVPFSYVYLHGLIRDSQGRKMSKTLGN
VIDPLDTIKEFGTDALRFTLALGTAGQDLNLSTERLTSNKAFTNKLWNAGKFILQNLPSQ
DETSVWENIHSFQFDKEESLCVLPLSECWVISKLHLLVDAVTVSYDKFFFGDVGRETYDF
FWSDFADWYIEASKARLYNNSGDSAACVTQAVLLYVFQNILKILHPFMPFVTEELWQALP
NRKEALMVSSWPQVSLPRDSNSIKKFENLQALTRSIRNARAEYSVEPAKRISASIVANEE
VLQYTSQEKVVLALLSRLDLQNVHFTNSPPGNAEQSVHLVAGEGLEAYLPLADMVDVTAE
VDRLTKRLSKMQAEYEGYATRLSSPKFVEKAPEDIVSSVREKAAEVEEKINLTKNRLSFL
KSTVLVSE
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgataatccaaacggcattctctgctccatccctttggtcctcttgctctgcctacagg
ttcaatctcaaccctctcctcttctccaaaactcgtcgtcgctctccttggcatttcacc
cgtctcagttcccgcctcttcgctgttgctgcatctgcaaatggcacgtttacttcccca
gagatagcaaagtcattcgactttacatcagaggaacgcatttacaattggtgggattct
caaggatattttaaaccaaactttgaccgtggtggtgatccatttgttatttcaatgcca
cctcccaatgttaccggttcactgcatatggggcatgcaatgtttgtgactcttgaggat
attatggttagatataatcgaatgaagggaagacctacactctggattccagggactgat
catgctggtattgcaactcagcttgttgtggaaagaatgcttgcatctgaaggaataaaa
agagtcgaaatgagtcgagatgacttcacgaagagagtttgggagtggaaagagaagtat
ggtgggacaatcacaaatcaaattaaaagacttggtgcttcttgtgattggagtagagag
cactttacccttgatgagcagctaagtggagctgtaattgaggcatttgtcaggcttcat
gataaaggtctaatttatcaaggaacatacatggtgaactggtctccaagtctacagact
gctgtttcagacttggaagtagaatatcatgaagaaaaaggtattctctattatatgaag
tatcgggtggctggaggttcaagtagtgattacctgacaatagcaacaacacggccagag
actttatttggtgatgtagctgttgcagtgcatcctaaggatggtcgatattcaaagtac
attggtaaaatggctattgtaccgatgacatatggtcgacatgttcctataattgctgac
atgcttgttgataaagattttgggactggtgtgttgaagataagccctggacatgatcac
aatgattataatattgctaaaaagcttggtttgcccatacttaatgtgatgaacaaggac
ggaacacttaacaatgttgcgggactgtactgtgggcttgatcggttcgaggctcggaag
aagctgtggtcagatctggaagaaacaggtctagctgtgaaaaaggagccacatacttta
cgagtacccagatcccaacgtggtggagaagtaattgagccacttgtaagcaggcaatgg
tttgttaccatggagcccttagcagataatgcccttcaagctgtagaaaaaggagatata
aaaatcattcctgaaagatttgagaagatttataatcactggctattaaatattaaggat
tggtgcataagtaggcaattgtggtggggacaccgcataccagtttggtatattgaggga
aaagacaatgaagaagaatatatagttgctagaaatgctgatgaagctcttaagaaagca
caagagaaatatgggaaggctgtaaagatttatcaagatccagatgtactagacacatgg
ttttcaagtgcattatggcccttcagtactcttggttggccagatgtgtcatcagaagat
tttaagcagctttatcctacaacagtgcttgaaactggacatgacatattgttcttttgg
gttgcgaggatgatcatgatgggaatcgagttcactggaagagttccattttcgtatgtt
tacctacacggtcttattcgagattcacaagggagaaaaatgtctaaaacattgggaaat
gtaatagatccgttagatacgataaaggaatttggcacagatgctttacgattcacactt
gctttgggaactgctggtcaggacctcaatttatccactgagaggttaacctccaacaag
gcattcacaaacaaattatggaatgctggaaaattcatattacagaatttgcctagtcaa
gatgaaacatctgtttgggaaaatatacattctttccagtttgacaaagaggagtctctt
tgtgtgctacctttgtcggaatgttgggtgatatcaaaacttcacttgcttgttgatgcc
gtcactgtaagctatgacaagtttttctttggagatgtcggaagagagacatatgatttc
ttttggagcgattttgctgattggtatattgaggccagtaaagctcgtctttacaacaat
agtggtgattccgcagcttgtgtaacacaggcagttctattatacgtttttcagaacata
cttaaaatattacatcctttcatgccatttgtgactgaggagctctggcaggcactcccc
aacagaaaagaagcactcatggtgtcttcttggccacaggtttcacttcctagggatagc
aactcgattaaaaagtttgaaaatctacaagcactgactagatctattcgcaatgctcga
gcagaatattctgttgagccagcaaagcgtatatcagcatccatagttgcaaatgaagaa
gtcctccaatatacatcccaagaaaaggtggttctagctcttctatcccggctagattta
cagaacgtccattttacaaattctcctccagggaatgcggaacaatcagtccacctagta
gctggtgaagggctagaagcatatctcccactggctgatatggttgatgtaaccgctgag
gttgatcgccttactaagcgtctttccaagatgcaagcagaatacgagggatatgctacc
cgcctcagttctccaaaatttgtggagaaagctcctgaagatatcgtcagcagtgttcgg
gaaaaagcagctgaagtagaagagaagattaacctcaccaaaaaccgtctatctttcctc
aaatcaactgttcttgtttcagaatag
DBGET
integrated database retrieval system
