Cannabis sativa (hemp): 115702602
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Entry
115702602 CDS
T08987
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
115702602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csav03400
]
115702602
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
115702602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
115702602
NCBI-ProteinID:
XP_030485875
LinkDB
All DBs
Position
X:complement(22833460..22839848)
Genome browser
AA seq
1179 aa
AA seq
DB search
MATIQSLPQPLRTSLRSGIILFDIATVVEELVFNSLDAAASTVSVFVGVGSSYVKVVDDG
SGIPRDDLVLLGERYATSKFDHLADKDNECKSFGFRGEALASISDVSLLEVVTKASGRPN
GYRKVMKGSKCLYLGIYDDRKDVGTTVSVRDLFYNQPIRRKYIQSSPKKVLQSIKKCVQR
ISLVHSNVSFKVVDIESEDVLLYTLPSSPMSLLTTCFGTEISTSLHELKSSSGKIKLSGY
ISSPCDNLSIKVFQYIYINSRYVCKGPIHKLVNQLATRYHWFDQGKAVNNFQTRKRSRAQ
IYPAFILNIRCPRSFYDLNFEPSKTYVEFKDWVPVLALLEEVIQDLWKENMSDIKGEDLL
LNGDGNTISLGDLHDVFPRNSTTGNKKGRIQNSEDSLDPISSHLKMPIKELNYMSQRKQD
MITNKSSQKCTQYFDDQEDEMDTFHTDNSLQAWDQPLAQCKLKVSKNYEHQPFISNNHSL
SPDDYCLVDEYTSGERCRVSADVNFSSSWGRDSFEADLGLSSEAVDSSLCCDHQELSNDV
AVSRDGKRPFLKSCSFRGCLPQERTLCTDDVCKFKSDNFKINQMLNWPYGGVNVSETNEN
FDFLSCPLREANTSRFQSSPTAEIGSFSRSSLRSFPLYEEPTTDYNDGFLSDSVKRIETI
GSNHLNLDPEWCSLSLDSISQPTPWDVDHYTDCRYSNDVLEKRSSQEKWNASCSYNEFSD
ADLGEFLPRHNLNKRLPSKSVNISNHGTDWLSEVSLGKNQLSSEMYKSQRDQNSYDESEG
NDHFSKRRSRSHSAPPFCRSKRKFLTLNFHSTGKGGNDPAYPEGRERWKPIVLGDSLLDN
RLDWKNLQDLKEDLTEIRSEERLEQSVCFDIQDAPFKDNVSLNCGSKWRNSCPKTAHNNK
LHHHDIQNESSILDISSGFLHLAGDSLVPESINKNSLKEAIVLQQIDKKYIPIVAGKTLA
VVDQHAADERIRLEELRQKVLSGEAKEITFLDAEKELMLPEIGHQLLHSYAKEIKEWGWI
CNIHAQDSKSFKRNLNLLHNRPTVIKLVAVPCILGVNLSDIDLTEFLQQLADTDGSSTIP
PSVLRVLNSKACRGAIMFGDALLHSECSLIIEELKHTSLCFQCAHGRPTTAPLVNLETLH
KQIAKTTLHTDDSNGLWHGLRRHELNVERAEQRLMSASC
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatccaatcattgccccaacctcttcgtacttcactgcgctctgggatcatt
ctttttgacattgccactgtggtcgaagagctcgttttcaacagcctcgacgctgctgct
tcaacggtatcagtttttgtaggcgttgggagttcttatgtcaaagtggtagatgatgga
tcaggcattccgagagatgatttggtgcttttgggagaaagatatgcaacatcgaagttt
gatcatttagctgataaggataatgaatgtaagagctttgggtttcgaggggaagcattg
gcttcaatttccgatgtatccttgttagaagttgtaacaaaagcttctgggaggcctaat
ggataccgcaaagttatgaagggaagcaaatgtttgtatctcggaatatatgatgatagg
aaggatgtgggaacgacagtttctgttcgggatttattttacaaccaaccaattcggagg
aagtatattcaatcaagccctaagaaggtcttgcaatcgatcaagaaatgcgtacagaga
atttcccttgtgcactcaaatgtatcttttaaagttgttgatatagaaagtgaggatgta
cttctctacacactaccttcttctcccatgtccctattgaccacttgttttgggaccgag
atctccacctctcttcatgaattgaaaagtagtagcggaaaaattaagctttctggatac
atatcttccccttgtgataatttgagcatcaaggtctttcaatatatctatattaattca
cggtatgtgtgcaaagggccaatccataaattggtgaatcagttggcaactagatatcat
tggttcgatcaaggaaaagctgtcaataatttccaaaccagaaaacgaagtagagctcaa
atataccctgctttcattttgaacataaggtgccctcgctccttttatgatttaaacttt
gagccatcaaaaacctatgtagaattcaaggattgggttcctgtacttgcacttcttgaa
gaggtcattcaagacttgtggaaggaaaatatgtctgatatcaagggcgaagatctactg
ttgaacggagatggaaacaccatatctttaggagatttacatgatgttttcccaagaaac
tccacaactgggaataagaagggcagaatccaaaattctgaggactctcttgaccctatt
tcttctcatctgaagatgcctatcaaagagctcaactacatgtcccagaggaaacaggat
atgattacaaataaaagctcacaaaaatgtactcagtacttcgatgatcaagaagatgag
atggatacatttcatactgacaattctcttcaagcatgggatcagccccttgcccaatgc
aagctcaaagtatctaaaaactacgagcaccagccgttcatttctaataaccactcttta
tctccagatgattattgcctggtagatgaatatacttctggagagagatgcagagtgagt
gcagatgttaacttcagttcttcgtggggaagagattcgtttgaagctgatctcggtctt
agcagtgaagctgttgatagttcattgtgttgtgatcatcaagaactcagcaatgatgtg
gcagtgagcagggatgggaagagaccttttctgaagagttgctccttcagagggtgcctt
ccacaagagaggactttgtgtacagatgatgtttgtaagtttaaaagtgataactttaag
atcaaccaaatgttgaactggccttatggcggggttaatgtttcagagactaacgagaat
tttgatttcttgtcatgtcctttgcgggaggccaacacatcaagatttcagtcctctcca
actgcagaaatcggtagtttttcaagatcttccctaaggtcattcccactttatgaagag
cctaccactgactataatgatggtttcttgtctgattcggttaaaaggatagagactatt
ggctctaatcatctcaatttggaccctgaatggtgctctttgagcttagattcgatttcc
cagcccacaccttgggatgtagatcattacactgactgcagatatagtaatgatgtactg
gaaaagagatctagccaagaaaagtggaatgcaagctgttcatacaatgaattttcagat
gcggacttgggtgaattccttcctaggcacaatttaaacaaaagacttccctctaagtcg
gtgaacatatcaaatcatgggacagactggttaagtgaagtatctcttggtaaaaaccag
ttgagtagtgagatgtacaaaagtcaaagagatcaaaatagttatgatgaaagtgaaggg
aatgatcatttctctaaacgaagatcaagaagccactcagctccgccattttgtagaagc
aagagaaagttcttgaccttaaacttccattctacaggaaaagggggcaatgacccagct
tatccagaaggtcgtgaacggtggaagcctatagttttgggggattcgctgttagacaac
aggctagattggaagaatctacaagacctgaaggaagacttaacggagattagaagtgag
gaaaggcttgaacagtctgtttgtttcgacattcaagatgctccatttaaagataatgtt
tccctgaattgtgggagcaaatggcggaacagctgcccaaagactgctcacaataataag
ttgcatcaccatgacatccagaacgagagtagtattctcgatatctcttcgggattcttg
caccttgctggtgactctttagttcctgaatctattaacaaaaacagccttaaggaagcc
attgttctccaacagattgataaaaaatacattccaattgtggctgggaaaactcttgct
gtcgttgatcagcacgctgcagatgaacgaatccgactagaggagttgcgtcagaaggtc
ttgtctggagaagcaaaggaaatcacttttctggatgcagagaaagaattgatgctgcca
gagattgggcatcagttactgcatagctatgccaaagaaattaaagaatggggttggata
tgtaacattcatgctcaggattcaaaatccttcaaaaggaatttgaatcttctccacaac
cggccaacggttattaagctcgttgcggtaccatgcatcttaggagtcaacttgtctgat
atagatctcactgaatttctccaacagctggctgataccgatggatcttcaacaatacca
ccctctgttcttcgcgtcctcaattccaaagcatgtcgaggtgcaattatgtttggggat
gcattgctacattcggagtgttcccttatcattgaagagctaaagcatacctccctttgt
tttcagtgtgcacatgggcggccgactactgccccgctcgtgaacttggagacactgcat
aagcaaatagctaagactacactgcacactgatgattccaacgggttatggcatggctta
cgccgacatgagctcaatgttgaacgcgctgaacaacgtttgatgtcagcatcttgttag
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