Cannabis sativa (hemp): 115702951
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Entry
115702951 CDS
T08987
Name
(RefSeq) probable E3 ubiquitin ligase SUD1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115702951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csav04121
]
115702951
Enzymes [BR:
csav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115702951
Ubiquitin system [BR:
csav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
115702951
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
115702951
NCBI-ProteinID:
XP_030486288
LinkDB
All DBs
Position
X:complement(20334495..20340942)
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AA seq
1105 aa
AA seq
DB search
MEIAPATPATESPSYEDTASPDSVAAASASDSSPEKELNASVASSSPAASRYDEDEDEED
VCRICRNPADSDHPLRYPCACSGSIKYVHQDCLLQWLNHSNARQCEVCKHAFSFSPVYAE
NAPARLPFQEFVVGMAMKACHVLQFFLRLSFVLAVWLLIIPFITFWIWRLAFVRSFGEAH
RLFLSHLSTTVILTDCLHGFLLSASIVFIFLGATSLRDYFRHLRELGGQDADRDDEGERN
GARAARRPPGQVNRNLVVDANGEDAGGAQGIAGAGQMIRRNAENVAARWEAQAARLEAHV
EQMFDGLDDGDGAEDVPFDELVGMQGPVFHLVENAFTVLASNMIFLGVVIFVPFSFGRII
LYYVSWAFSTTSAPVLSTVMPLTESALSLANITLKNALTAVTNLSDGGEDNGVLGQVAEV
LKANASGSNELSSNISSPLSADLLKAASIGTSRLSDVTTLAVGYIFIFSLVFFYLGFIAL
VRYTRGEPLTMGRFYGIASMAETIPSLFRQFLAAMRHLMTMIKVAFLLVIELGVFPLMCG
WWLDVCTIRMFGKSMAQRVQFFSASPLASSLVHWVVGIVYMLQISIFVSLLRGVLRNGVL
YFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKLAMRMAPSIFP
LDISVSDPFTEIPADMLLFQICIPFAIEHFKLRTSIKSLLRYWFTVVGWALGLTDFLLPS
PEANGGQETGNAEPGRQDRLLGGQDQPLVPLPGADDLNGATFASADPNVAEDYDVDEQSD
SERYSFVLRIVLLLVVAWMTLLVFNSALIVVPVSLGRTIFNTIPVLPITHGIKCNDLYAF
IIGSYVIWTAIAGVRYSIEHVKTKRIAVLCGQIWKWCGIVTKSFALLSIWIFVIPVLIGL
LFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDESWRIKFERV
REDGFSRLQGLWVLREIVFPIVMKLLTALCVPYVLARGVFPVLGYPLVVNSAVYRFAWLG
CLCLSVFCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEDRELRRTEAEAETSTEMEN
FDMQQGTALIQDGGLRFRHAIQHEA
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgcaccggccactccggccaccgaatcacccagttatgaagatactgcttcg
cctgatagcgtcgccgcggcttcggcttcggattcatcgcctgagaaggaactgaacgcc
tccgtggcttcgtcttctccggcggcgtcgaggtacgatgaggatgaggacgaggaggac
gtgtgtaggatttgccggaacccagctgattctgatcatccgcttaggtatccgtgcgcg
tgtagtgggagtattaagtacgttcatcaggactgtctccttcagtggctcaatcacagc
aacgctcgccagtgcgaggtttgcaagcatgcattttccttttctcctgtatatgctgag
aatgcaccagcaaggcttccttttcaagagtttgtggttgggatggccatgaaagcatgc
catgttctgcagttctttttgcgtttaagttttgtgcttgctgtttggcttctcatcatc
ccattcattacattttggatttggcggttggcttttgtaaggagttttggtgaagcacat
agattatttctgagtcacctatctaccacagttatccttactgattgtctgcatgggttc
ctactttctgctagcattgtgtttatatttcttggggccacatctctgagggattatttt
aggcatttacgagaacttggaggacaggatgctgatagagatgatgaaggggaaagaaat
ggtgctcgtgctgcaagaagacctcctggacaagttaataggaatttggttgttgatgca
aatggggaagatgctggtggtgcacagggaattgccggagcaggtcaaatgattagaagg
aatgctgaaaatgtagcagcacggtgggaggcgcaagcagctcgtcttgaggctcacgtt
gaacaaatgtttgatggtttagatgatggtgatggtgcagaggatgtaccctttgacgag
cttgttggcatgcagggtcctgtctttcatttggttgaaaatgcatttacagttttggcc
agcaatatgatatttcttggtgttgtaatctttgtgccattctcttttggtcggatcatc
ctctattatgtatcttgggctttctccacaacaagtgctccagttctgtcaacagtaatg
ccactaacagaatcagcactatctttggcaaatattacattgaagaatgctttaactgct
gttactaatttgtctgatgggggagaagacaatggtgtgcttggacaggttgctgaagtg
ttaaaagctaatgctagtggatcaaatgaactctcaagcaatataagttcaccactttct
gcagatcttttgaaggcagcaagtattggcacatcacgactatctgatgtcacaactctt
gctgttggatacatattcatattttctttagttttcttctaccttgggttcattgctttg
gttcggtacacgagaggtgagcctttaactatggggagattttatggtattgcttcaatg
gcagagaccatcccgtccctcttcaggcagttcttagcagccatgaggcatttaatgaca
atgatcaaagttgctttccttcttgtcattgaacttggtgttttcccattaatgtgtgga
tggtggctagatgtatgtaccataaggatgttcggaaagtcaatggctcaaagagttcag
ttcttttcagcatctccattggcaagttcattggtgcattgggttgtcggaattgtttac
atgctacaaataagcatatttgtcagtcttcttcgaggggttttgcgtaacggagtactc
tacttcctacgagatccagccgatcccaactacaatccgttccgtgatcttattgatgat
cctgttcacaagcatgctcgcagggtgctgttatctgttgcagtatatgggagtcttata
gtgatgttggtgtttctaccagtcaaacttgccatgcggatggcaccctccattttccca
ctggatatttcggtatctgatccatttacagaaattccagcagacatgcttctgtttcaa
atatgcattccgtttgccattgagcattttaaattacggacatcaattaagtcccttctt
cgctattggtttacggtagttggctgggcacttggtttaacagatttcttgttgcccagt
cctgaagctaatggtggtcaggaaacaggaaatgcagagccagggaggcaggatagacta
ctaggtgggcaggaccagccactggtgccactcccaggtgctgatgatctgaatggagca
acatttgcatctgcggatccaaatgttgcagaagactacgatgttgatgagcaatctgac
tcggaaaggtacagctttgttcttcgcattgtcctcttgctggtggtggcatggatgact
ctacttgtcttcaactctgccttgatagttgtaccagtttcacttggaaggacaattttt
aacactattcctgttctcccaataacacatggaattaagtgcaatgatttatatgctttc
atcattggaagctatgtcatttggactgctatagctggagtcagatattccattgagcat
gttaagacaaaaagaattgcagttctgtgtggtcagatctggaagtggtgtggcattgtt
acgaagagctttgcacttctatcaatctggatatttgtgattccagtattaattgggtta
ctgtttgagcttctggtgattgtaccaatgcgagtgcctgtggatgaaagcccagttttc
cttttgtatcaggactgggcactaggtcttatttttcttaagatctggactagactggta
atgctggatcacatgatgccactggtagatgaaagttggagaataaaatttgaaagagtg
agagaagatggtttctcgaggcttcaaggtctatgggtgctacgtgagattgttttcccg
attgtcatgaagttgttgactgccctttgtgtcccatatgttctcgccaggggggtgttt
cctgtgctcgggtacccattagttgttaattctgcagtctatcggtttgcctggttggga
tgcctgtgtttgagcgtcttttgcttttgtgcaaagcgattccatgtctggtttaccaac
ctgcacaattcaattcgcgatgaccgctatttgattggccgtcggcttcataatttcggg
gaagaccgtgaattaaggagaactgaagctgaagctgaaacctcaactgaaatggaaaac
tttgatatgcaacaaggtacggctctgattcaagacggtgggctgcgatttagacacgct
atccaacatgaagcttaa
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