Cannabis sativa (hemp): 115703137
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Entry
115703137 CDS
T08987
Name
(RefSeq) protein CHROMATIN REMODELING 25
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115703137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csav03400
]
115703137
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
115703137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SLFN-g3_helicase
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
115703137
NCBI-ProteinID:
XP_030486495
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All DBs
Position
X:20736028..20743393
Genome browser
AA seq
925 aa
AA seq
DB search
MDDEDEILSDSDSSYSDSGEDFSAGTDEEDEENVDDVSENNQPPTKAQQPPSDEDRKSKN
VDALLRGNLIVTRQSLLPRVLSVTEGSAVCRKPFKPPCSNGYSGQNDQLSRRLCARKRFV
PWGSSTPVLVPITNLLNTPEPVLKHEVEEEIVTLPPGIDPLVLWQSDELATDMKQIVVDP
LLVRFLRPHQREGVQFMFECVSGLCSSSNIFGCILADDMGLGKTLQSITLLYTLLYQGFD
EKPMVKKAIIVTPTSLVSNWEAEIKKWVGERVHLIALCESTRDDVISGIDRFTSPRSSLQ
VLIVSYETFRMHSSKFSHSESCDLLICDEAHRLKNDQTITNRALAGLSCKRRILLSGTPM
QNDLEEFYAMVNFTNPGILGDATHFRRYYEAPIICGREPNATEEERKLGGERSGELSAKV
NQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSDLYNHFIHSKNVKRAISEDVKQAKILA
YITALKKLCNHPKLIYDTVKSGGSGTSGFEDCMRFFPPEMFSGRSGSWTGGDGAWVELSG
KMHVLARLLGHLRQKTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLV
NHFNDPSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV
YIYRFLTTGTIEEKVYLRQMSKEGLQKVIQKEQTDSLTTQGNSLSIEDLRDLFSFHENVR
SEIHEKMNCIRCQSDDNMPETENKSMNRSCESDQDTSDIGGFAEIAGCLDKLKSSEKQVG
TPLEEDLGSWGHHFYPTTVPDAIFQASAGDEVSFVFTNQIDGKLVPIESMVRPNMQGSEG
NENCPNKLNQNLNQKTMVLPQRRKLAESVVSNQNFKRSTLSSFYRPMPKVTVECVTRTLS
PIEHPVVRPHETLSPHTLQHDDDFA
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgaagacgaaattctctctgattcagattcttcctattccgattctggcgag
gacttctctgctggcaccgacgaagaagatgaagaaaacgtcgatgatgtttctgagaat
aatcagccaccaaccaaggctcaacaaccaccgtccgatgaagataggaaatcgaagaac
gtcgatgctcttctcagaggtaaccttatcgtgacaagacaatcactgcttccgcgagtt
ctatcggtgactgaaggatcagcagtttgcaggaagccttttaagccaccatgctctaat
ggctactctggtcaaaatgatcagctatcccggcgtctctgcgctcgcaaacgatttgtt
ccctggggatcttcaactccagtattagtgccaattaccaatcttctaaatacacctgaa
cctgttttgaaacatgaagtggaggaggagattgtaactctgcccccagggattgatcct
ctggtcttgtggcagtctgatgaattagctactgacatgaagcaaatagtagtggatcca
ttgcttgttcgtttcctacgaccgcatcaaagagagggcgttcagtttatgtttgaatgt
gtctcagggctatgtagctcttcaaacatatttggatgcattctggcagatgatatgggt
ttgggaaagacattgcagtcaatcacattactttatactcttctttatcaagggtttgat
gagaaaccaatggttaaaaaagcaattatagtcactccaactagtcttgtaagcaattgg
gaagctgagataaagaagtgggttggagaaagggttcatctcattgctctatgtgaaagt
accagagatgatgtcatttctggtattgacaggttcacaagtcctcgcagttctctacag
gtccttattgtttcgtacgagacattccggatgcattcatcgaaatttagccacagtgaa
tcttgtgaccttttgatttgtgatgaggctcacaggttaaagaatgatcaaaccataacg
aatcgggcattggccggtctttcatgcaaacgtcgtattttgctgtctggaactccaatg
cagaatgacctggaagagttctatgcaatggttaattttactaatccgggaattttgggt
gatgctactcatttccgccgatactatgaggctcccattatatgtggacgagaacctaat
gctactgaagaggaaaggaagttgggtggtgagcgctctggagaattaagtgcaaaagtt
aatcagtttatattacgaaggacaaatgcactattatcaaaccatctgccaccaaagatt
atcgaagttgtttgttgcaagttgactcctctccagtcagatttgtataaccattttata
cattccaaaaatgttaaacgggcaatttccgaagatgtaaagcaagcaaagattttagcc
tacataacagcactcaagaagctttgcaatcaccctaagctcatctatgatactgttaaa
agtgggggttcaggaacttcaggttttgaggactgtatgcgttttttccctcctgagatg
ttttctggaagatctgggtcatggactggtggggatggggcttgggtcgaactgtctgga
aaaatgcatgtcttagcaaggttactgggtcacttgcgtcaaaaaacagatgatcggatt
gtccttgtttcaaactatactcagacactagacctttttgctcaattgtgtcgcgaaaga
agatatccgtatttgagacttgatggaaccacatccatcagcaaaagacaaaagctagta
aatcattttaatgacccatcaaaggatgaatttgtgtttctcttaagcagtaaagctggt
ggttgtggtctcaatttgatcggtggaaatcgacttgttttgtttgatcctgattggaat
cctgccaatgacaaacaagctgctgctagagtctggagagatggacaaaagaagagagtg
tatatttacagatttttgaccacaggcacaattgaagaaaaggtatatctgcgtcagatg
tcaaaagaagggctccaaaaagttatccaaaaggagcaaactgatagccttacaacacag
gggaattcgctttccatagaagatctgcgtgatctgttcagcttccatgaaaatgtgagg
tctgaaattcatgaaaaaatgaactgcatccgttgccaaagtgatgataatatgcctgaa
acagagaacaaatccatgaacagaagctgtgagtcagatcaagacacctctgatattgga
ggatttgcagaaattgctggatgcttagacaagttaaagagctcagagaaacaggtaggg
acacctctggaggaagacttgggtagttgggggcatcatttttacccaacaacagtaccc
gatgctattttccaagcttcagctggcgatgaggtgtcatttgtttttacgaaccaaatt
gatggcaaacttgtacctattgagtcaatggtacgtccaaatatgcaaggatctgaagga
aatgagaattgtcccaacaaattaaatcaaaatctgaaccagaaaactatggtgttgcct
caacgtaggaaactcgcggaatctgtcgtttccaatcaaaattttaaaagaagcacatta
tcttccttctacaggcctatgccaaaggtaactgtggaatgtgtaacacgtactttaagt
cctatagaacacccagtagtaaggcctcatgaaacattgtctcctcatactttgcaacat
gacgacgacttcgcctaa
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