Cannabis sativa (hemp): 115703637
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Entry
115703637 CDS
T08987
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
115703637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csav03400
]
115703637
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
115703637
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
PpnN_C
Motif
Other DBs
NCBI-GeneID:
115703637
NCBI-ProteinID:
XP_030486734
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All DBs
Position
1:27655856..27660372
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AA seq
691 aa
AA seq
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MARNKETLLLLIDVGPSMHNALPEIEKVCFSLIQKKLIFTKYDEVGVILFGTQDTNNELT
NEVGGYEHVVVLRKIGVVDVDLLETLQPLPRGTHSGDFLDAIIVGMDMLIKKYGVTNKGK
KRLCLITNAICPVKPSNEGTEDDQVTIIADKMNAHGMKMESIVVRGKLIAEADEKIMDEN
DRLLNIFSKRTRAKLVHVESPISLLGALRTRNISPVTAFRGDLEVSPKLKIKIWVYKKTA
EEKFPTLKKYSDKAPATDKLATHEVKVDFEYKRVEDPSTVVPPEQRIKGYRYGPQVVPIS
SAEWYAVKFKPEKSVKVLGFTDAGNIMRHYYMKDAYVFIPEPGKTKAILAVSALARAMKE
ANKVAILRCVWRQGQGNVVVGVLTPNISDRDNIPDSFYFNVLPFAEDVREFQFPSFSNLP
ASMQPTDQQQEAADRFVQMFDLAPPDKEEALLPEFTPNPALERFYRYLELKSKHPDEAVP
PLDETLSKITEPDPELISQNKSVLDEFRMAFNLKENPKLKKSTSRSLQDKPSGSNDRKGY
ALLPAPSANPDTNESKSSVKVEEIGNVTPIEDFEAMISRRDSPKWVNKAIAEMKKRIFNL
VEDSYNGDNYPKAVECLAALRKGCILEQEPKQFNDFLHHIFKFCQEKFLTCFCEFVASTQ
ITLISKTEAADSEFTDEEARRFLGKPEPTME
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcaacaaggaaacactgcttttgttgatcgatgttggcccatcaatgcacaat
gctttgcctgagattgaaaaagtttgcttttccttgattcaaaagaagctcattttcacc
aagtatgatgaagttggagttatcttgttcggaacccaagatacaaataatgaattgaca
aatgaagtgggtggatatgaacatgtggtcgttttaagaaaaattggagtggtggatgtg
gatcttcttgaaactttacagccactccctagaggaactcactctggagattttcttgat
gctataattgtcggaatggatatgttgattaagaaatatggagtgacaaacaagggaaag
aaacgtctttgcctcattacaaatgcaatatgtccagttaaaccttcaaatgaaggaacc
gaagatgatcaggtcaccataattgctgacaaaatgaatgcgcacggcatgaaaatggag
agtatagttgtcaggggaaagcttattgcagaagcagatgagaaaataatggatgagaat
gatcgcctgttaaatatattttcaaagagaacacgtgcaaagctggtgcatgttgaaagt
ccaatctcattgcttggcgcattgagaactcggaatataagtccagttacggcattcagg
ggtgatcttgaagttagccccaaactgaagattaagatatgggtttacaagaaaacagca
gaggagaagtttcccactttaaaaaaatattctgataaagctccagcaactgataaatta
gccacacatgaagtgaaggtagattttgagtacaaaagggttgaagatcctagtacagtt
gttccaccagaacagaggattaaaggttatcgttatggaccccaagtggttcctatatca
tctgctgaatggtatgctgtcaagtttaagccagaaaagagtgtgaaagttctaggtttt
acggatgctggaaacattatgcgccactattacatgaaagatgcctatgttttcattcct
gaacctggaaaaacaaaggccattcttgctgtttctgccctagcaagagctatgaaagaa
gctaacaaggtagcaattttgcgttgtgtttggagacaaggacaggggaatgttgttgtg
ggggtgttgacaccaaatatatctgacagggataacattcctgattcattttacttcaat
gtacttccttttgctgaagatgttcgagaatttcaattcccctcttttagcaatctccca
gcttctatgcaaccaacagaccaacagcaagaggcagcagataggtttgtacaaatgttt
gaccttgcacctcctgataaagaggaagctcttctgcctgagtttacaccaaatcccgcg
ctggagcgtttctaccgttatctcgagttgaaatcgaagcacccagatgaagctgtacct
ccacttgatgaaactctttcaaagatcactgaacctgatccagaactaatttcacaaaac
aagtctgttcttgatgaatttcggatggccttcaacctcaaagaaaatccaaagctgaag
aaatcaactagccgatcattgcaagataaaccatctggatcaaatgacagaaagggttat
gccctcttacctgctccctctgccaatcctgatacaaatgaaagtaaatcttccgttaag
gtggaggaaatcggtaatgtgacacctatagaagattttgaagccatgatttcccgcagg
gatagtccaaaatgggttaacaaagctattgcggaaatgaaaaaaaggatattcaattta
gtagaagactcttacaatggggataactatcctaaagccgtggaatgtttagctgccctt
cgcaagggttgtatccttgagcaagaaccaaaacaattcaatgatttcctgcatcatatc
ttcaaattctgccaggagaaattcctcacctgcttttgtgaatttgtagcatccacacag
atcaccttgatatcgaagacagaagcggcggacagtgaatttactgatgaggaagctaga
agatttttggggaaacccgagccaacgatggagtga
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