Cannabis sativa (hemp): 115703640
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Entry
115703640 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115703640
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
csav
Cannabis sativa (hemp)
Pathway
csav04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115703640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csav04131
]
115703640
Membrane trafficking [BR:
csav04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
115703640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
Clathrin
TPR_Vps41
VPS8_N
TPR_VPS8_2
WD40_CDC20-Fz
ANAPC4_WD40
WD40
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_EML_2
WDR55
zf_RING_Vps8
zf-RING_Vps41
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_HPS5
MinC_N
Motif
Other DBs
NCBI-GeneID:
115703640
NCBI-ProteinID:
XP_030486737
LinkDB
All DBs
Position
1:complement(23907814..23917938)
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AA seq
1962 aa
AA seq
DB search
MELDLTSFLDDDDDDDQLNSIPHRTIDDILNDSDSSTSSSPPPSPPSSSRRLSSDLDRSS
SLTRHSSQSSIDGTRKSTEGTKPTQLEERRIGPRTTSVGRFKFGDSSEDVIRRGSRPLPS
LFGGVRSNAKPGAALAAAAAASRSIPTPHAAAIKSRRSLGIGGFQKALDDVELGSTNGTG
VAADSETVVSDELGSNSTGDLNVTGSEISSLDSKLVEVNNIDDDEKTDETSKRGEVSEIS
FVGEVLHCEETVSDDTRAGGAGEGLLGSIMETEVNSTSVNVGKDIENSAVDRVESRNFGT
NSCDENEPGVDESSKFVGVSDNDEKGSSCWDVADNSGELAMESTTEELEKGDSINNVPYM
KDNSDEDLDGDDASSTSEIKELVEERIGELESRGISQKAEKKSQPCKKPLEIAEELEKKH
ASTSMHWVEGAAAQPMRLEGIRRGSTTLGYFDVNASNNITRAISAQALRRDYGSPQVLAV
HTNYIAVGMGRGVILVVPSKYSAHNADDMEKKMLILGLQGERSYSAVTSLCFNQQGDILL
AGYFDGHITFWDVLKVSAAKVISGEHTAPVVHALFLGLDSQATRQFKAVTGDSKGLVLLH
ASSAISLFSRFNVKTQCLLDGQTTGTVLSASPLFFDESFGGASLSSQGNAVGPASSIGSM
MGGVVGGDAGWKLFNEGSSMVEEGVVVFVTYQTALVVRLSPTLEVYSQLSRPDGAREGSM
PYTAWKCTKQPYSSSTENSPTEVSEKVSLLAIAWDRKVLVAKLVKSELKVYGTWSLESAA
IGVAWLDDQMLVVLTVTGQLCLFANDGTVIHQTSFAVDGSLGNDFVCYHTHFMNIFGNPE
KSYHNCLAIRGASIYILGPSHLIVCRLLPWKERIQVLRKAGDWMGALNMAMTIYDGEAHG
VVDLPRTLDAVQKAIMPFLVELLLSYVEEVFSYISVAFCNQIEKMDLLDDPSSISSSVHN
EIKEQYTRVGGVAVEFCVHIKRTEILFDEIFSKFVAVQQKDTFLELLEPYILRDMLGSLP
PEIMQALVEHYSSKGWLQRVEQCVLHMDISSLDFNQVVRLCREHGLYGALFYLFNKGLKD
FRAPLEELFAVLQNTHREANSALGYRMLVYLKYCFSGLAFPPGHGNLPPSGLQSVREELL
QFLLESSDTRNSRVGTRLTSGVPYLNLYFLLEMDIEATLDVLRCAFEEDKIPQPELSPHN
MADTGMNTKEDNILTESQNLLIQRTIDVLIPFLEKGISQADRTSGDDEGSAEEWPSAKEI
CHLFEFIAHYVACGRAKVSKRVLDQILEYLTLENLQSSASSHSRISKQRERQVLALLKVV
PETDWDASSVLQLCEKACFHQVCGLIHTIRHQYLSALDSYTKDVDEPIHAFSFINKILLE
LDGNDRDAFRSGLICRIPELINLNREGTIFLVIDHLNDEGSHILSELRAHSKSLFLYLKT
VIEIQLSGTLNFDYLRNDDITSMKDKSEELTAYLERISDFPKILRSNPVHVTDDMIELYL
ELLCQYEPDSVLKFLETFDSYRVDHCLHLCQEHGIIDAASFLLERVGDAGSALLLTLSSL
DNKFAKLADAMGSGAARKQHFSTVKKLGEVKEIENILRACIGLCQRNTPRLNPEEAEILW
FRLLDSFCEPLMGSFGDGGLLEGGNQNRILAQTSDADNFEEASIINWRIPRSHKGAHLLK
KLFSQFVKEIVEGMIGYVRLPNIMSKLLSDNGSQEFGDFKLTILGMLGTYGFERRILDTA
KSLIEDDTFYTMSLLKKGASHGYAPRSPICCICSCVLAKNPSSSSIRVFICGHATHAQCE
LLENGASGAGSSSGCPVCMPNKKSQKSRNKSVLVEKGLVKKSSTRPQQTHGTTVYPHDHD
LSDYANGLQQVSRFEMLNMLQKEQRFVQVENVPQLRLAPPAVYHEKVKKGTDILTGESSS
GLSRTEKQNSRSKPLKDLKLKGSSLRFPLKSNIFGKEKISKR
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atggagctcgacctcacctccttccttgatgacgacgacgacgatgatcaactcaactcc
attccccaccgtacgattgatgacattctcaacgactctgattcttccacctcatcgtct
cctcctccatccccaccctcttcctcccgtcgtctatcttccgatctcgaccgttcgtcc
tccctcactagacactcctcccagtcttcgattgatgggactcgcaaatctacggaaggt
actaaacccacacaattggaggaaaggagaattggacctcgaaccacttcggttgggcgg
ttcaagttcggcgattcgtccgaggatgtgatccggagaggctcgaggcctttgccgtcg
ttgttcggaggggttcgttctaatgcgaagcccggtgcggcgctcgcggctgcggcagcc
gcttcgaggtcgattccgacaccgcacgcggcggcgatcaagtcgaggagaagtttaggg
attgggggtttccagaaggctcttgacgatgttgaattgggttccactaatggtactggt
gttgctgcggattctgagactgttgtttctgatgagttgggttccaattcgactggtgac
ttaaatgtgactggttcggaaattagtagtttagattcaaagttagtggaagttaataac
attgatgatgatgagaagactgatgaaacttcaaaaagaggtgaagtttcggagatttct
tttgtgggtgaagttcttcattgtgaagaaacagtgagcgatgatacaagggctggcggt
gctggagaaggattgttgggttcaattatggaaaccgaggttaattctacttcagttaat
gttgggaaggatattgagaattctgctgttgaccgtgttgaaagtagaaacttcggaact
aattcttgtgatgaaaatgagcctggagtggatgagagttcaaaatttgtcggtgttagt
gataatgatgaaaagggtagttcttgctgggatgttgctgataatagtggagaactcgca
atggagtcgacgactgaggaattagaaaagggagattcaataaacaatgtgccttatatg
aaagataacagtgatgaggatcttgatggtgatgatgctagctcaacaagtgagattaaa
gaacttgtggaggagagaattggggaattggagagcaggggaatcagtcaaaaagcagaa
aagaaatcacagccttgtaagaagccacttgaaatagccgaagagctcgagaagaaacac
gcttctacaagtatgcattgggtagaaggtgctgctgcccaaccaatgaggcttgagggt
attcggagaggatccacaacattgggatactttgatgtgaatgccagcaataacattaca
cgggccatttcagctcaggcattaaggcgcgattatggttcaccgcaggtcttggctgtt
catactaattacattgcagtaggaatgggaagaggggttattctagttgttcccagtaaa
tactctgcacataatgctgacgatatggaaaaaaagatgttaatactagggttacaaggg
gaaagatcttattctgctgtaacttctttatgcttcaatcagcaaggggacattctctta
gctggttactttgatggtcatattactttttgggatgtcctgaaggtatccgctgcgaag
gtcatctctggtgaacatacagcaccagttgtacatgcattatttcttgggctggattct
caggctacacgtcaatttaaggcagtgactggtgatagtaagggtttggttttattacat
gcctcgtcagcaatatctttgtttagtaggttcaatgtcaaaacacagtgtcttcttgat
ggacaaacaacgggaacagtgctatcagcttcaccactcttctttgatgaatcttttgga
ggcgcttcactgtcctctcagggaaatgcagtgggtcctgctagcagcatcggcagcatg
atgggtggtgtagttggtggggatgcaggttggaaactctttaatgaaggctcttctatg
gtagaagaaggtgttgtcgtctttgtcacctatcaaactgctctggtggtgagacttagt
ccaactttggaggtctattcacaactttctaggccagatggagctcgggaaggttccatg
ccttacactgcctggaaatgcacaaaacaaccatacagttcgtctactgagaattcacct
actgaagtttcagaaaaagtttcactgcttgcgattgcttgggatcgaaaggttctggta
gcaaagctggttaagtcagagctaaaggtatatggcacgtggtctcttgaaagtgcagct
ataggcgtggcttggttggatgatcagatgctagtggttctgactgtgactggacaacta
tgtttgtttgcaaacgatggaactgtaattcatcaaactagttttgctgtagatggttct
ctcgggaatgactttgtttgttaccatactcacttcatgaatatctttggaaatcctgaa
aaatcttatcacaattgcttagccataaggggagcttctatctacatactcggcccatca
catctaattgtgtgccgccttctgccttggaaggaacgaattcaggttttacggaaagca
ggtgattggatgggtgctttgaacatggccatgacaatttatgatggtgaagcacatggt
gttgttgaccttcctaggaccttggatgctgtacagaaggccattatgccttttctggta
gagttgcttctttcatatgtagaagaagtattttcctatatttcagtggcattctgcaac
caaattgaaaagatggatctactggatgatcccagtagcataagtagttctgttcacaat
gaaataaaagagcaatatacacgtgttggtggagttgcagttgaattctgtgtacatatc
aagagaacagagatcctatttgatgaaattttctccaagtttgttgctgttcaacaaaaa
gacacatttttggagctgctggagccatatatattaagggacatgcttggttctctacct
ccagagattatgcaagcactggtagaacattatagcagcaaagggtggttacagagagtt
gaacagtgcgtccttcacatggatatttcttcattggattttaaccaggttgtacggtta
tgtcgggagcatggactttatggtgcactgttttatctcttcaataaaggattgaaagat
ttcagggcacctttagaggagctttttgcggttttacaaaatactcacagggaagccaat
tctgcccttgggtatcgaatgctagtttatctgaagtactgtttttcaggccttgctttt
ccgccaggacatggtaaccttcctccttcaggcttgcaatctgttagagaagaactgctg
caatttttgttggagtcatctgatactcgaaattcaagagttggtacaagattaacatct
ggagtgccatatctgaacctttatttcctcttagaaatggatatcgaagctaccctagat
gtgctgagatgtgctttcgaagaagataaaattccacaacctgagctttctcctcataat
atggctgatactggcatgaacacgaaggaagataacattttaacggaaagtcaaaattta
ttaatacagcgtacaatagatgttctcattccatttcttgaaaaaggcatttcacaggca
gatagaacttctggtgatgatgaaggatcagcagaagagtggccgtcagcaaaagaaata
tgtcatttgtttgagtttatagcacattatgttgcgtgtggaagagctaaagtctcaaaa
agagtcctcgatcagattttggagtatttaacactagagaatctgcaatcaagtgcttct
tcacatagcagaatctcaaaacaaagagagaggcaggtacttgcgcttctgaaggtagtt
ccagagactgattgggatgcctctagtgtgctgcaactatgtgagaaagcatgttttcac
caggtttgtggtctaattcataccatcaggcatcagtatctttctgctttggatagctac
acgaaagatgtagatgagcccattcatgcattctcttttatcaacaaaatcttattagag
ctcgacggaaacgaccgtgacgctttccgatcaggcctcatttgtcgtattcctgagcta
attaacttaaacagggagggtactatcttcttggttattgaccatttgaatgatgaaggt
tcacatatattatctgaacttcgtgctcattcaaaaagcctttttctttatttgaaaaca
gtcatcgaaattcagttatctggcaccctgaactttgattatttgagaaatgatgacata
acgagtatgaaggataaatctgaagaactgacagcttacttggaaagaatctctgatttt
cccaagattctgcgcagtaatcctgtacacgtgacagatgatatgattgaactatatctt
gagttattgtgtcagtatgaacctgattcagttctcaagttcctagagacttttgatagc
taccgcgtggatcattgtttacacctatgccaggaacatggaattatagatgctgcatca
ttcttattagaaagggttggtgatgctggcagtgctctattacttacactttccagcctt
gacaacaagtttgccaagcttgcagatgctatgggaagtggggctgctcgtaaacagcat
ttcagtactgtcaaaaaattgggagaggtgaaagaaatagaaaatatattgcgtgcctgt
attggattgtgccaaaggaacacccctcgtttgaatcctgaagaagcagagatactatgg
ttcagattactagactcattttgtgagcctttgatgggttcatttggtgatggtggactt
cttgaaggaggaaatcaaaatagaatattagctcagacatccgacgcagataattttgaa
gaggcgtccatcatcaattggagaattccaagatcccacaaaggtgctcatctcttgaaa
aaattgttctctcagttcgttaaggagattgttgagggcatgataggatatgttcgactt
ccaaacatcatgtccaaacttctctctgataatggtagccaggaatttggtgactttaaa
ctcacaatactgggaatgcttggaacatatggcttcgaaagaagaattctggataccgcc
aaatccctaatagaagatgacacattctataccatgagcttactcaagaaaggagcatct
catgggtatgcccctcgtagtccaatttgctgtatatgcagttgtgttcttgccaagaac
ccttctagctcaagcattcgggttttcatttgcggtcatgctactcatgctcagtgtgag
cttttggagaacggagcatctggtgctggttcctcatccggatgccctgtctgcatgcct
aacaagaaatcacagaaatcaagaaataaatcagtccttgtagagaaaggtctagtaaag
aagtcttcaacgagaccccaacaaacacacggaacaactgtttacccacacgaccatgat
ttgtcagactatgctaacgggcttcagcaagtctcacggtttgagatgttgaacatgtta
caaaaagagcaaagatttgttcaggtagagaatgtacctcagttgaggcttgccccacca
gctgtatatcatgaaaaggtaaagaaaggaactgatattctaacaggagaaagtagcagt
ggtctgtcgagaacagaaaaacagaacagcagaagtaagccactaaaagatctaaaactt
aaaggctcgtctcttagatttcccttgaaatcgaatatatttggcaaggagaaaatcagc
aagaggtga
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integrated database retrieval system
