Cannabis sativa (hemp): 115704319
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Entry
115704319 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115704319 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115704319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csav03021
]
115704319
03019 Messenger RNA biogenesis [BR:
csav03019
]
115704319
Transcription machinery [BR:
csav03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
115704319
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
115704319
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
SurA_N_3
Motif
Other DBs
NCBI-GeneID:
115704319
NCBI-ProteinID:
XP_060963118
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All DBs
Position
1:28855479..28859796
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AA seq
554 aa
AA seq
DB search
MRPLYNSFPNHSTNMQNPAQPSQQQVMGPQSQFGLNNSQIPNPFGSPCMPNAPTSMATQP
GFMNAPNNRFPSQNNLMGAPHLGNPNGPLPQQGNPQVGFGPQIGVNHMNSIATFPIRGQG
FQPGNMSNLPHFNQNMGLPFGQFCMPNHLQNMNQFLPMQMQMQNLSQFVPQNTYGVMNQA
LQPTIPQNPAFLASPQFGNMHYNQIVPQVNQNQHNLSLPVMDVNTLKPSPVANQQLQGNL
PMEQTNNMQSSGFMGTQRNHLQSGGGLNPSNGKNPSNRNFNRNTKGGMSQGRSQNSQFHG
MKHGNKKFGTPNAHRGRGSNNEKAGRFGTDNFLNQGREEKRSLALTYSEEEIRKWCEERR
KNYPSQRNIEKKLMKKQQDKESFEKEAELRREQLKEILAKQAELGIEVAEIPGCSLKEEN
GRPLNERGRFPNKFDKRRRSDKRERYPKKRRMNDNNNNNASSNVPSLSIRKPTLLEKLLS
ADITRDKSYLLQAFRFMVANSFFKDGADKPLTFPSVIFKEKSSEDGGIVEEKFPNDNSDD
DEDDKEEEEGEIIT
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcctctctacaattcctttcctaatcattccaccaacatgcaaaaccccgctcaa
ccttctcaacagcaggttatggggcctcaatcccaatttggtttaaacaattctcaaatt
cctaacccttttggtagtccttgtatgcccaatgcgcctacttccatggcaactcaaccc
ggcttcatgaacgcacctaacaatcgtttcccttctcaaaataatcttatgggagcgccc
catttaggtaacccgaatggccctttgcctcaacaaggtaatccccaggttggatttggt
ccacagattggtgtaaaccatatgaactccattgccacatttcccattcgcgggcaagga
tttcaacccggtaacatgtcgaatttaccgcatttcaatcagaatatgggtttgcccttt
ggacaattctgtatgccaaatcatttgcagaatatgaatcaatttttgcctatgcaaatg
caaatgcaaaatctttctcagtttgttcctcagaatacatacggggttatgaaccaagca
ctacagcccacaattcctcaaaatcctgcctttttggctagtccgcaatttggtaatatg
cactataatcagattgtaccgcaagttaaccagaatcagcataacttgtctctgcctgtg
atggatgtaaatacactgaaaccatcacctgtagcaaatcaacaattgcaagggaacttg
cctatggagcaaactaataacatgcaatcttcaggattcatgggaacacagagaaaccat
ttacaaagtggcggtgggcttaatccttccaatgggaaaaatccatcgaatagaaacttc
aacaggaatacaaaaggagggatgtctcaaggcagatctcagaattctcaatttcatggt
atgaaacatggaaacaaaaagtttggaactcctaatgctcacagaggaagagggtcaaat
aatgagaaggctggaaggtttggaactgacaactttttgaaccaagggagggaagaaaaa
agatctcttgctttgacgtattcggaagaagaaattcgaaagtggtgtgaagaacggaga
aagaactatccatcccagagaaacatagagaagaagctaatgaaaaagcagcaagacaaa
gagagttttgagaaagaggctgagctacgccgagagcaacttaaggagattctagctaag
caagctgaattgggaattgaagttgcagaaataccggggtgttctctcaaagaagagaat
gggagaccattgaatgagaggggaagatttcccaacaaatttgataaaaggaggagatcc
gataaaagagaacggtatcctaagaagcgaaggatgaatgataataacaacaataatgct
tcgtcgaatgttccttcattaagtattaggaaaccgacattattggagaaacttctcagt
gctgacataactagagataagagctacttgctgcaggctttcaggttcatggtagctaat
tctttcttcaaagatggagctgataaacctttgacatttccttctgtaatattcaaggaa
aagtccagcgaggacggcggcattgttgaagagaagtttccgaatgataatagtgatgat
gatgaagatgacaaggaggaagaagagggtgagatcatcacctaa
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