Cannabis sativa (hemp): 115704421
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Entry
115704421 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115704421
KO
K14311
nuclear pore complex protein Nup188
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115704421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115704421
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115704421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACDC
MlrA_C
Motif
Other DBs
NCBI-GeneID:
115704421
NCBI-ProteinID:
XP_030487489
LinkDB
All DBs
Position
X:complement(10254924..10272253)
Genome browser
AA seq
1959 aa
AA seq
DB search
MANPKSVDPSLWWDPFSLLLTEIEQASPSSDLPPSLVKKLKDNHYWFVDTVSCFKPPNEK
SREALNSQQLKIGSHQLKIQPELKDKALQISPLLCLDEVQSYILVERSFEKYNVVLDSIV
QEFPHVALLQYYIERQCLLKCTRRILMHALSLGNGSRKDADIWKEALNLISDGLEEKLVS
VLQELLSSSHPAQMDVDLFTLWAEETLIEDYLVLDILFLTYYESFCICNGQRWKTLCSLF
KGILSGSYNLRKLEVSTEAIQSSYQAKIQLLLVLIETLDLENLLQMVHDETPFREVSSHF
SLIDVQEMDTIVSSLNAFETKEAGPLILTWAVFLCLISSLPGKEENNVLMEIDHISYVRQ
AFEAASLRSFLEILESYLLNESDGPVAGYRGVLRTFISAFIASYEINIQLEDSTLNLILD
ILCKVYRGEESLCIQFWDRESFVDGPIRCLLCSLEGEFPFRIVELIRLLSSLSEGTWPAE
CVYNFLDKSVGISSLFEITDDSLVDATSQIVETRAPLHVPGIEGLLIPSSTRGHILKLIG
PNTALVRWEYTHSGVLVLLLRLAQGLYLDGNEEALLTLDLLNQMISSNEAVCFALMDIGN
SFHAQETALSGQLESRVWVVEIICTLVRKLSPNPGSAAIMAIGVNILAKMLKCCPSYIAA
AAVKANLFDVALNTNILDTGSNNSLSGSWLLSGKLATMLLIDCEQNENNCFLTTAVLDFT
MQLMETGFENDTVLALVVFSLQYVLVNHEYWKFKVKHSRWRITLKVLELIKKGIAMTSYS
GKLVGVIWDMLLSDSSIHSTLFRIVCTTSQALEKLHVSRLFDVMEIEGLSLAISSVLEIL
YNVLAKFPKDTSSSLPIFLQSVLSSATKPISVVAAVVSLVSYFRNPGIQIGATKVLSMLL
MTADFLPAYFSASSFGLDDKQVTDLKDSVSFILLEQSEENEDLFVATVNLFTAAARYQPA
FFIAVFANKENMDVQASNAGGGKLPAIEVSSGAVESKDSSLVDAVLCYIVNSDSHINNKP
FVLLNVLNFLKALWERAAQYINILARLKSSEKFWKQLSKCVPLTSPDSLPDSLTEMEALN
QAYRYQCQSSIMEIMAYDMFLQKKLSQVESQKKQVPESKGSTDKSKAANLYDHRDVLSTW
CHGSVLVNLIKLLTTYDYDNKSFYHAEVSASLVTVHLIEKVTAGDTGSLSVSILQKISTM
SKKLRSHPAFSELLAQYSQSGYSEGKELNNLILNDLYYHLEGELEGREISAGPFKELSEY
LVDSKVMHNYQHKYDNDFLITYKDVYLFDPERVRADLGSDLWDYLKWKTSKEITKRMLSQ
MMWANSTVLLRNSKLAALKSLITVLTIYENDEKNATLGGISNELIRTCIDHICKCFRDTV
ESLAPYRGSGSEDTFHFLSAQSELLLHLLRSAHKSLNFSVCVHLLKTAGSGLRVLCDFRP
SATEVNITIKLLLVLLLSTVEFCCLSSHFGGMIDKESVEDMAKISNVCLGLLPILCNCIV
IADHCTLSLTTVDLILRNFLTPNSWFPVIQSHLQLNDVILKLQDKSSFSSVPVVMKFFLT
LARVREGAEMLVNYGFLSSLRFLFTEYMDGRPLSISTDKLEKPQQVWGLALAVITAMVES
LGDSPSCRDILDNVIPYLFSEKGYIISYYLSAPDFPFDDHDKKRPRTQRTEISLSALKET
EHTIMLMCVLARHWKSWVKAIKEMDSQLREQSIHLLAFISKGSQRLGDSSSINAPLLCPP
VLKEEFDNCNKPSFMNSKNGWFALSPLGCVSRPKFSAVSTTSTSLIIRSQPAESANHAAQ
TYFSDVVSLEIYRISFLLLKFLCLQVDGAARRAEEVGYVDLAHFPELPMPGILHGLQDQA
ISIVAELCEANKLNQIKKEIQNACCLLLQIMEMALYLELCVLQICGMRPVLGRVEDFSKG
VKKLLRATEGHAFLKSSVKSLKQIISFVYPGLLQTEELM
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccctaagtctgtcgacccctctctttggtgggatcctttctctctactcctc
actgaaattgaacaagcctctccctcctctgatcttccaccttctctggtgaagaagttg
aaggacaatcactattggtttgtcgacaccgtttcttgcttcaaacctccaaatgagaag
tccagggaggctttgaattctcagcaactaaaaattgggtcacaccagctgaaaattcag
cctgaattgaaagataaagctttgcaaattagtcccttgttgtgtctagatgaggttcag
tcttatatcctcgtcgaaagatctttcgagaagtacaatgtagttctcgactctatagtt
caagagtttcctcacgtggcattgctacaatactacattgaacgacaatgcctgctgaag
tgtaccaggaggattctcatgcacgctttatctctaggaaacggctctcgaaaagatgcc
gatatatggaaggaggcattaaacctgatttctgatggtttagaagaaaaactagtctct
gttctccaagagcttctatcttctagtcaccctgcccaaatggatgttgacctcttcacc
ttgtgggctgaggagacgctgattgaagactatttggttttggacattcttttcctcact
tattatgagtcattttgtatttgcaacggtcagaggtggaaaacattgtgctcacttttc
aagggaattttgtccgggtcatataacttaagaaagctggaagtttcaactgaagcaata
cagtcttcttatcaagcaaagatccaactgttacttgtcctaatagaaactctggacttg
gaaaatcttttacagatggtccatgatgaaactcctttcagggaggtttcttctcatttt
tccttgattgatgtccaagagatggatacgatagtgtcaagtcttaatgcttttgaaact
aaggaagcaggcccactaattctaacatgggcagtgtttctttgtctgatttcatcactt
ccaggaaaagaagaaaacaatgttctaatggagattgatcatattagctatgttcgtcaa
gcttttgaagctgcttcactgagatcttttcttgagatccttgagagttacttattaaat
gagtcagatggacctgttgctggttatcgaggtgtattgagaacatttatttctgcattt
attgcatcttatgagatcaatattcagctggaagacagtactcttaatttgatactggat
attctctgcaaagtttaccggggagaggaatcactttgcattcagttttgggacagagaa
agttttgttgatggtcctattcggtgtcttctttgtagcctagaaggtgaattccccttt
cggattgtggaacttattcgcctcttatcatccctatctgaaggaacttggccagcagaa
tgtgtgtataactttcttgataagtcagtgggcatttcatccttgtttgagattacagat
gattccttggtggatgccacatcccaaattgttgaaacacgtgctccattgcatgtccct
ggtattgaaggtctgctgatccctagtagcactcgtggacatattttgaaattaattggt
ccaaatactgcacttgtacgatgggagtatacacattctggggtgcttgtcctgctgctg
cgtctagcccaggggctttatttggatggcaatgaggaagctctacttactcttgatctt
cttaatcagatgatatcttctaatgaggctgtgtgttttgctttaatggacattggcaac
tcatttcatgctcaagaaactgctttgagtgggcaattggaaagtcgagtgtgggttgtt
gagatcatctgcactctggtcaggaaattatctcctaatcctggtagtgctgctataatg
gccataggtgtcaacatcttggcaaagatgttgaaatgttgcccttcatacattgctgca
gcagctgtaaaggcaaatttatttgatgtggctttaaatacaaatattcttgatactggc
tctaataattccttgagcggatcgtggttgctttctggaaaattggcaacaatgctattg
attgactgtgagcagaatgagaataactgcttcttaactacagcagtgctggatttcaca
atgcagctgatggaaacgggatttgagaatgacactgttcttgcattagttgttttttct
ctgcagtatgtccttgtaaaccatgaatattggaaattcaaggtgaaacatagtcgctgg
agaataacattgaaggtgcttgaactgattaaaaaaggcattgcgatgacatcatactct
ggaaagctggttggggtcatctgggacatgttactttctgattcttcaatccatagtact
ctttttcggattgtttgcacgacttcacaagcgttggagaaacttcatgttagccgtctc
tttgatgttatggaaattgaaggtttatcacttgctatatcgtctgttttggagattcta
tataatgtgcttgccaaatttcccaaggatacatcttccagcctccccatctttcttcaa
tcagtattgtcatctgcaacaaaaccaatatctgtagttgctgctgttgtctccttggta
tcttattttcgcaatcctggtatacagattggcgcaactaaagtactttcaatgctgttg
atgacagcagatttcttgccagcatatttttctgcaagcagctttggtttggatgataaa
caggttactgatctgaaagattctgtaagctttattctactcgagcaatctgaagaaaat
gaagacttatttgttgctactgtcaatcttttcactgctgctgctcgttatcagcctgct
ttttttattgctgtatttgccaataaagagaatatggacgtccaagcaagtaatgctggt
ggtgggaagctgccagcaattgaggtttcctctggggcagtagagtctaaagattcaagt
cttgtagatgcagtactttgttatattgtaaattctgatagtcatatcaataacaaaccc
tttgtgctgcttaatgtgctcaactttttaaaggcattgtgggaaagggcggcccaatat
atcaatatattggcgaggttgaaaagctctgagaagttctggaagcaattgtcaaaatgt
gttccactaacttctccggattctttgcctgatagcctgactgagatggaagctctaaat
caggcatacagatatcaatgtcaatcttccataatggaaataatggcatatgacatgttt
ctgcaaaaaaagttgtcacaggtggagtcacaaaaaaaacaagtacctgagtcaaaggga
agcactgataaatcaaaagctgcaaatctatatgatcatagagatgttttatcaacatgg
tgtcacggttctgtcttggttaatctaatcaagttacttactacttatgactatgataac
aaatcattttatcatgcagaggtttctgccagtttagttacagtgcatttgattgagaaa
gtaactgctggtgatactggaagcttatctgtatcaatacttcagaagatcagcaccatg
tctaaaaagcttagaagtcatcctgctttctctgaattgttagcccaatattcacagagt
ggttatagtgaagggaaggaactaaataatttgatacttaatgatctttattatcatctt
gaaggagagcttgagggtcgtgaaattagcgctgggccatttaaagaactttctgaatac
ctggttgattcaaaagttatgcacaattaccaacataagtatgacaatgactttcttata
acttacaaagatgtgtacttgtttgatcccgagcgtgtacgggctgatttggggtcagat
ctttgggactatttgaagtggaaaacatctaaagagatcacaaaaagaatgctgtctcag
atgatgtgggcaaattcaacggtgttgcttagaaattcaaagcttgctgcattgaaatca
ttaataactgtcttaaccatctatgagaatgatgagaaaaatgccacattgggagggatc
tctaatgaacttattcgaacatgtatagatcacatatgcaagtgcttcagggacactgtg
gaatcattagctccatatagaggcagtggctctgaagacacatttcattttctttcagcc
caatcagaactgcttctccatcttttgcgatctgcacataaaagcctcaacttctctgtt
tgtgtacatttgttgaaaacagcaggttctggccttcgggtactgtgtgacttcaggcca
tcagctactgaggttaacataacaattaagcttttacttgtattgcttctctcgacagtg
gagttttgttgtctcagttcacattttggtggcatgatagataaggaatctgttgaggac
atggctaaaatttctaatgtgtgtctgggactactacccattctttgcaactgtatagtc
attgctgatcactgcaccctctccctgacaactgttgacttgatactaagaaatttcttg
acacccaactcatggttccccgttatacagtctcacctccagctgaacgatgttattttg
aaacttcaggacaagagttccttttcatctgtccctgttgttatgaagttctttttgacc
cttgctcgtgttagggaaggtgctgagatgcttgttaattatggttttctctcatccttg
agatttttgtttacagagtacatggatggtagacctttgtctatctcaactgacaagttg
gagaagcctcaacaagtttggggccttgctttggctgtcattacagctatggttgagtcc
ttaggagacagtccttcatgtagagatattttagacaatgtgataccgtacttattctca
gagaaagggtatattatttcttattatctcagtgcaccagactttccttttgatgatcat
gacaaaaaaagacctaggactcaaagaacagaaatttctctatcagctctcaaggaaact
gagcatactatcatgttaatgtgtgttcttgcaagacactggaaatcgtgggttaaggcc
atcaaagaaatggattcccaattgagagaacaaagtatccatcttttagccttcattagc
aaaggatctcaacgtctaggagactcttccagtatcaatgcgccactcttatgtcctcct
gtcctaaaagaggagtttgataactgcaataagccgtcatttatgaacagcaaaaatgga
tggtttgccctttcacctcttggttgtgtctcgagaccaaaattttcagctgtttctaca
acttcaacatctctcataatcagaagtcaaccagccgaaagtgctaatcatgctgcacaa
acgtacttctctgatgttgtttctctagagatatatagaatttcatttctactattgaaa
tttctatgtttgcaagttgatggtgccgctagaagggcagaggaggtaggttatgtggat
ctcgctcattttcctgagcttccaatgcctggtattttacacggcttacaggatcaagca
atcagcattgttgccgagctatgcgaagccaacaaattgaaccagattaaaaaagaaata
cagaatgcgtgttgcttattactacagataatggagatggccttgtacttggaactttgc
gttctacagatatgtggcatgagacccgtgctaggacgtgttgaagatttttctaaggga
gtgaagaagttgttaagagcaactgaaggacacgctttcctgaaatcctcagttaagtcc
ttgaaacagataatatcatttgtctatcctggattgttacagaccgaggagcttatgtga
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