Cannabis sativa (hemp): 115704763
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Entry
115704763 CDS
T08987
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csav04121
]
115704763
Enzymes [BR:
csav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115704763
Ubiquitin system [BR:
csav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115704763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_4
zf-C3H2C3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
115704763
NCBI-ProteinID:
XP_030487831
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All DBs
Position
1:2803677..2805715
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AA seq
445 aa
AA seq
DB search
MNMGLFFWLFLLSGFTVSLANVVLLGKNVTLSFGDIEANFAPAIKGSGECGIMYLAEPLN
ACSPLSNQLQSINNSSSPFVLIIRGGCSFENKVRTAQKAGFKAAIIYDNEDGGVLVAMAG
NSAGIKVHAVFVSKASGEKLERYAGNTDIELCLIPSFENSAWSVMAISFISLLAMSAVLA
TCFFVRKHRIRRERPRASRVREFHGMSSRLVKAMPSLIFTVVSEDNCTSATCAICLEDYS
VGEKLRILPCRHKFHAFCVDSWLTTWRTFCPVCKRDARTSTSNPPASESTPLLSSSHVSL
ASSSVLSSMRSSFASSSAIQIGSSSISRSPSLSRPHSLASTSYSSQHPLRPYHQSPSLSR
GSMDLQNASSQRSHAYLISSHSLGFPSLSSLNSRYLSSHIPSPSNASPASPPFVRSSTYQ
QNLLHCSNSAASFSSFTSAQSLPDC
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggggttgtttttctggctctttctcttgagtggcttcaccgtgagtcttgcc
aatgtagtcctccttgggaagaatgtcacactttctttcggggacattgaagccaatttc
gctcctgcaataaagggttctggggaatgtggaattatgtatttggctgagcctctaaat
gcctgctcacccttgagtaatcaacttcaatccattaacaatagctcttctccatttgtg
ctgatcattagaggaggttgcagttttgagaataaagttcgaacagctcaaaaagcagga
ttcaaagctgcaatcatctatgataatgaagatggtggagtcttagttgctatggctgga
aattcagctggtataaaagtacatgctgtctttgtttcaaaagcttctggtgagaaacta
gagagatatgctggtaatacagatatagagttgtgtctaatcccaagttttgagaattca
gcatggtcagttatggcaatatccttcatttctttgctagcaatgtctgctgtcctggct
acatgtttctttgttcgcaagcatcgaatacgaagagaacgacctcgagcttctcgtgtc
agagaatttcatgggatgagtagtcgtttggtgaaagcaatgccaagtttgatatttact
gttgtttcagaagataattgcacttcagcaacatgtgccatttgtcttgaagactacagt
gttggagagaagctgaggattctgccatgtcgtcacaaatttcatgcgttttgtgtggat
tcctggcttacaacatggaggactttttgcccagtttgcaaacgtgatgcaagaactagc
acaagcaatccaccagcttcggaatctacgccgctgctttcatccagccatgtttcttta
gcttcctcatctgtactgtcgtcaatgagatcatcttttgcatcctcctctgccatacaa
attggctcgtcgtcgatatcgcgttccccttctctttctcgtcctcactctctcgcaagc
acttcctattcttctcagcaccctcttaggccctaccaccaatccccctccttaagcaga
ggctcaatggatctccagaatgcatcttcccaaagatctcatgcttatttgatttcaagc
cactccttgggttttccatcgttatcatcccttaactcaagatacctgtcttcacacatt
ccaagccccagcaatgcctcgccagcgtcaccgccttttgtgagatcttctacttatcaa
cagaatttgttgcactgcagcaattctgctgcaagtttctcctcattcacttctgcacaa
tccctacctgattgttga
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