Cannabis sativa (hemp): 115704855
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Entry
115704855 CDS
T08987
Name
(RefSeq) WD-40 repeat-containing protein MSI3
KO
K10752
histone-binding protein RBBP4
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03082
ATP-dependent chromatin remodeling
csav03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115704855
03083 Polycomb repressive complex
115704855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csav03036
]
115704855
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
115704855
Histone modification proteins
HAT complexes
HATB complex
115704855
HDAC complexes
Sin3A-HDAC complex
115704855
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
115704855
PRC2.2
115704855
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
115704855
Heterochromatin formation proteins
Other heterochromatin formation proteins
115704855
Chromatin remodeling factors
NuRD complex
115704855
NuRF complex
115704855
NuRF complex (fruit fly)
115704855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_WDR75_1st
WD_LRWD1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
ANAPC4_WD40
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
WD40_CFAP43
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
115704855
NCBI-ProteinID:
XP_030487928
LinkDB
All DBs
Position
X:9342416..9345051
Genome browser
AA seq
400 aa
AA seq
DB search
MADEQDAGQQQVEEEYSVWKKNSPFLYDLIISNPLEWPSLTVHWSPSSPRPHKTDPSLAA
HKLVLGTHTSEGIPNFLLVADVFLPTNIKDNVFDVNDANSIIPKVEITQKIQVDGEVNKA
RFMPQKPSIIGAKTSGSEVVVFDCTKQELKPEGGDFDPDLRLRGHDKEGYGLSWNPNKEG
YILSGSHDCKICLWDVSAVAEDKVLDPLHVYTGHESVVGDVSWHLKNGNLFGSVGDDCKL
IIWDLRTNQSQQTVKAHEKEVNYLSFSPFNEWILATASSDTTVGLFDMRKITEPLHVLSS
HTEEVFQVEWDPNHEAVLASSADDRRLMIWDLNRIGDEQLEGDGDDGPPELLFSHGGHTA
KISDFSWNKEEPWVISSVADDNTLQVWQLADSIYGDAIDG
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgagcaagacgcagggcagcaacaggtggaggaggagtacagtgtgtggaag
aagaactctccgttcttgtacgatctcatcatctctaaccctcttgaatggccatctctc
acagttcattggtccccttcgtccccacgaccccacaaaaccgacccatctctcgccgcc
cacaaacttgttcttgggactcacacttccgagggcatccccaactttcttttggtcgcc
gatgtttttctcccgaccaatatcaaggacaatgtttttgacgttaacgacgccaactcc
attattcccaaggtggagataactcagaagatacaagttgatggagaggtgaataaagca
cgatttatgccgcaaaaaccgtctattattggcgcgaagacgagtggttctgaggtggtt
gtgtttgattgtaccaaacaggaattgaaacccgaagggggtgactttgatcctgatttg
aggttaaggggtcacgacaaagaagggtatgggttatcttggaaccccaataaggagggt
tacatattgagtggttcccacgattgtaagatatgtttatgggatgtgtctgctgtagct
gaagacaaagtgcttgatccactgcatgtttatacgggtcacgaaagtgtggttggagat
gtctcatggcatttgaagaatggtaatttatttgggtcagttggcgatgactgtaaattg
atcatatgggacttgcgcacaaatcagagccagcagactgtcaaagctcacgagaaagag
gtgaactatctttctttcagtccattcaatgagtggatcttggccacagcatcttcagac
acaactgttggtctgtttgatatgcggaagataacagagccattgcatgttttgagtagt
cacacagaggaggtatttcaggttgaatgggatcctaatcatgaggcagtgttggcatct
tcggctgatgacaggaggcttatgatttgggaccttaacaggattggagatgagcaactg
gaaggagatggtgatgatgggcctccggagctcttgttctctcatggtggtcatactgcg
aagatatcagatttctcttggaacaaagaagagccatgggtcatttcaagtgtagccgac
gataatactcttcaagtatggcagcttgctgatagtatatatggtgatgccattgatggc
tag
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