Cannabis sativa (hemp): 115704889
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Entry
115704889 CDS
T08987
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00040
Pentose and glucuronate interconversions
csav01100
Metabolic pathways
Module
csav_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115704889
Enzymes [BR:
csav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
115704889
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
PITH
NosD
Motif
Other DBs
NCBI-GeneID:
115704889
NCBI-ProteinID:
XP_060974758
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Position
1:complement(48282725..48284540)
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AA seq
410 aa
AA seq
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MKMGRWSSKLVVNIGVVVLCWVVGTSAKAVVSTYNVVSLGGKGDGKTESSKGFLAAWDKA
CSSTNPAVVYVPPGRFLLKNVVFTGQCKNRAITFRIAGTLLAPSDYTILTNSPNWISFQY
VNGVTISGGILDGQGTSLWKCKNSPSTNCPTGATTLGISNSKNVKVLGVTSLNSQMFHIV
INGCNNVKLQGVKVMAPGNSPNTDGIHVQLSTGVTILNTKIGTGDDCVSIGPGTANLWME
NLACGPGHGISIGSLGKDAKEAGVQNVTLRTATFRGTQNGVRIKSWGRQSSGFARKIVFQ
QVTMVDVENPIVIDQKYCPRNEGCPGKVSGVRVSDVTYQDIRGTSATEVAVKFDCSAANP
CNGIRLQDVKLSYNKKKKNNKDGIINTSAQASCSNAKGSASGIIQPSSCL
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgggaaggtggtcatcaaaattggtggttaatattggtgttgttgtattgtgt
tgggtggtagggacatcagcaaaagcagtggtgtcgacatacaatgtggtgagtttggga
ggaaaaggggatgggaaaacagagtcgagcaaaggtttccttgcagcatgggacaaggcc
tgcagttccaccaatcccgctgtggtatacgttcccccaggcagattcttgctcaaaaat
gtggtcttcactggccaatgcaaaaacagagctatcacgttccgcattgcaggaacactg
ctcgccccatcagattacacaatccttaccaactcccctaactggatttcctttcagtat
gtcaatggggtcaccatttctggtggaatccttgacggtcaaggcacttctctgtggaaa
tgcaaaaactcaccctctactaattgccccaccggagccaccacactgggaatttcaaac
tcaaagaatgtaaaagtgttgggagtaacatctttgaacagccaaatgttccacatcgtg
atcaacggttgcaacaacgtcaaactacaaggcgttaaagtgatggcaccagggaacagc
cccaacacggacggcatccacgttcagctctccacaggcgtaaccatcctcaacaccaag
ataggaaccggagacgactgcgtctccataggacccggcacagccaacctctggatggag
aacttggcctgcggacctggccacggcatcagcataggcagcctgggcaaggacgccaag
gaggcaggggtccagaacgtgacgctcagaacggccacgttcaggggcacccaaaatggg
gtgaggataaaatcttgggggaggcagagcagtgggttcgccaggaagattgtgttccaa
caggttacgatggtggacgttgagaatccgatcgtgattgaccagaagtactgccccaga
aacgaggggtgcccggggaaggtgtctggggtgagagtgagcgatgtgacttaccaagac
atacgagggacttcggccactgaggtggcagttaagttcgattgcagcgctgccaatcct
tgtaacggaattcggttacaggatgtgaaactcagttacaataagaagaagaagaataat
aaggatgggattattaatactagtgcccaagcttcttgttctaatgccaaaggaagcgct
tctgggataatccagccttcaagttgtttgtaa
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