Cannabis sativa (hemp): 115704979
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Entry
115704979 CDS
T08987
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03440
Homologous recombination
csav03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115704979
03460 Fanconi anemia pathway
115704979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csav03032
]
115704979
03400 DNA repair and recombination proteins [BR:
csav03400
]
115704979
Enzymes [BR:
csav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
115704979
DNA replication proteins [BR:
csav03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
115704979
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
115704979
Bloom's syndrome complex (BTR)
115704979
FA (Fanconi anemia) pathway
115704979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
BCNT
UFL1
dsDNA_bind
Motif
Other DBs
NCBI-GeneID:
115704979
NCBI-ProteinID:
XP_030488057
LinkDB
All DBs
Position
1:complement(20296595..20304193)
Genome browser
AA seq
721 aa
AA seq
DB search
MMKKSPLPLQSSSSRRNDNHIYGKEALVKLLRWHFGYADFRGKQLDAIQAILSGRDCFCL
MPTGGGKSMCYQIPALVKKAGIVLVVCPLIALMENQVAALKEKGIAAEYLSSTQTSSVKN
KIHEEIDSGRPSLRLLYVTPELIATPGFMSKLTKICARGLLNLIAIDEAHCISSWGHDFR
PSYRKLSSLRSHFPSVPILALTATAAPKVQKDVIESLCLQDPLVLKSSFNRPNIYYEVRY
KDLLNDVYSDLSNVLKSDGDVCAIVYCLERTACDDLSAHLSKFGISSAAYHAGLNDKLRS
SVLEDWISSKIQVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLLSKS
LLYYGIDDRKRMEFILRNAEGKKSKASNAQEGLSKKSLTDFHQMVEYCESSGCRRKKILE
SFGEQVSASLCKKSCDCCKHPNLVAKYLEELTTTSVLRNKGGSSQIFMSSSSCVNEGNFS
EFWNRDDEASGSEEAISDSDDGIEVIRRLGHSKLPKKSGFNEKMDFLQRAEEKYYESKHE
QSNKQNKNAVSDSLRESSRQRLLNAFKQARERLGDIKHQVETSATFLENECYKKYGKTGK
SFYYSQVASTVRWLSTTTSVELTDRLGAIASSASQPETSSLASPTLDLGHQEHTTEYFES
SVVPKTLTCASPIECFSSPSAKLPAIPSFSEFINSKKAKDKQPRRSPGGVEKNSEKRMKL
Q
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaagtctccattgccattgcagagctcatcgagtcggaggaacgacaaccat
atttacggcaaagaagctctggtgaagctcttgcgctggcatttcggatatgcggatttt
agaggcaagcaattggacgccattcaagctattttgtcagggagagattgcttctgtctg
atgccaactggagggggaaaatccatgtgttatcaaatccctgcactggtaaagaaagct
ggaatcgtgcttgttgtttgtcctttaatagcattgatggaaaaccaagtggctgccctg
aaagagaaaggaattgctgctgaatatctgtcgtcaacccagacgtcatctgttaaaaat
aagattcatgaagaaattgattctggaaggccatctttaagactactgtatgttacccca
gaattgattgcaacaccaggatttatgtcaaagctgacaaagatttgtgctagaggatta
ctgaatctcatagccatagatgaggcacattgcatttcttcttggggacatgacttcagg
cctagctaccgcaagctttcatctttgagaagccactttccaagtgtacccatcctagct
ttgacagctacagccgctccaaaagttcagaaagatgttatagagtccttgtgcttgcaa
gacccattagtcctcaagtcttcttttaatcgccctaatatctactatgaagttcgatac
aaggaccttttgaatgatgtctattctgatttgtctaatgtactgaaatccgacggagat
gtttgtgccattgtttactgccttgaacgtacggcatgtgatgacttgtctgctcatcta
tcaaaatttggcatttcttctgctgcttaccatgcagggttgaatgataaactgcgtagt
tctgttctagaagattggatttcttctaagatacaagttgttgttgctacggtggctttt
gggatgggtatagatagaaaggatgtcagaattgtttgccattttaacattccaaagtca
atggaagccttctatcaagagtcaggtagagctggtcgtgatcaactactctccaaaagt
ttgttgtactacggaatagatgatcgcaaaagaatggaatttattctgaggaatgcagag
ggtaaaaagtcaaaggcttccaatgcccaggaaggcttgtcgaaaaagtctctgacggac
ttccatcagatggtagagtattgtgaaagttctggatgccgcaggaaaaaaattcttgag
agtttcggtgagcaggtaagtgcatcattgtgtaagaagtcatgtgattgttgcaaacat
ccaaatctagttgcgaagtatttggaggagcttacgaccactagtgttcttaggaacaaa
ggtggttcctctcaaatttttatgagcagctcttcttgtgtaaatgaaggaaatttttct
gaattctggaatcgtgatgatgaagccagtggttctgaggaagccatatctgattctgat
gatggtattgaagttattaggagactaggccattcaaagttgccaaaaaaatctggattt
aatgagaagatggatttcttgcaacgtgcagaagaaaaatattatgagagcaaacatgag
cagagcaataaacaaaacaagaatgctgtatccgacagcctgagagagtcaagtaggcaa
agactattaaacgctttcaagcaagctcgggagaggcttggtgacataaagcatcaagtg
gaaacatcagccacttttctcgaaaacgagtgttacaaaaaatatgggaaaaccgggaaa
tcattctattattcacaagtggcaagtactgtgaggtggctatcaaccacaacttcagtt
gagctaactgatcggcttggtgccattgccagttctgcatctcaaccagaaacttcatct
ctagcttctcctactttggatctgggtcatcaagaacacaccactgaatattttgaatca
agtgttgtacctaaaactctcacatgtgcttcaccaatagaatgtttttcttctcctagt
gcaaaactgccagcaattccatcattttcagagttcattaacagtaaaaaggcaaaggac
aagcaaccgagacggtcacctggtggagttgagaagaattcagagaaaaggatgaagttg
caatag
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