KEGG   Cannabis sativa (hemp): 115705029
Entry
115705029         CDS       T08987                                 
Name
(RefSeq) clathrin heavy chain 1
  KO
K04646  clathrin heavy chain
Organism
csav  Cannabis sativa (hemp)
Pathway
csav04142  Lysosome
csav04144  Endocytosis
csav05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:csav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115705029
   04142 Lysosome
    115705029
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    115705029
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csav04131]
    115705029
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csav04147]
    115705029
Membrane trafficking [BR:csav04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    115705029
Exosome [BR:csav04147]
 Exosomal proteins
  Proteins found in most exosomes
   115705029
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B
Other DBs
NCBI-GeneID: 115705029
NCBI-ProteinID: XP_030488124
LinkDB
Position
1:11117668..11129302
AA seq 1704 aa
MAAANAPIAMREALTLPSVGISPQFITFTHVTMESDKYICVRETSPQNSVVIIDMSMPNQ
PLRRPITADSALMNPNSKILALKALVPGTSQDHLQIFNIELKAKLKSHVVPEQVVFWKWI
TPKLLGLVTQTSVYHWSIEGETEPVKMFERTANLANNQIINYRCDPTEKWLVLIGIAPGA
PERQNLVKGNMQLFSVEQQRSQALEAHAAAFAQFKVPGNENPSTLISFATKTFNAGQITS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYSLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTSEASALGGFYAINRRGQVLLATVNEQTIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
SGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKTNLPEHGFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKGGLYVRALQHYTELPDIKRVIVNTHAI
EPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAARTGQIKEVERVTRESNFYDPEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTSNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIES
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWEKVLNPENGFRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLFE
EAFAIFKKFNLNVQAVNVLLDNIRSIERAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLDVIRAAEDVNVYDDMVRYLLMVRQKVKEPKVDGELIYAYAKIDRLADI
EEFILMPNVANLQSVGDRLYDEALYEAAKIIYAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEFYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVL
ALRVDHTRVVDIMRKAGHLRLVKPYMIAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDSFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIEQGKKECFASCLFVCYDLIRADVILELAWMNNMLDFAFPYLLQFIREY
TGKVDELVKDKIEALNENKAKEKEEKDVIAQQNMYAQLLPLALPAPPMPGMGGPGMGGYA
PPPMGGMGMPPMPPYGMPPMGSSY
NT seq 5115 nt   +upstreamnt  +downstreamnt
atggcggcggctaacgctccgatcgccatgagggaagcccttacgcttccgagcgttggg
attagtcctcaattcatcacgtttacgcatgtcactatggaatctgataagtacatatgc
gtgagggaaacttccccgcagaatagtgttgttataatcgatatgagtatgccaaatcag
cctctgaggaggcctattactgcagactctgcactgatgaatcctaattctaaaatcctt
gcattgaaagctctagtcccggggaccagtcaagatcacttgcaaatatttaacattgag
ttgaaagctaaattgaagtcgcatgtagtgcctgagcaggttgtattttggaaatggatt
accccaaagttgttgggtctggttacacagacctcagtatatcattggtcaattgaaggt
gagactgaacctgtgaagatgttcgaaagaactgctaatctggcaaataatcagataata
aactatcgttgtgaccctactgaaaagtggttggttttgattggaattgcccctggtgcc
cctgagaggcaaaatttggtcaaggggaatatgcaactcttttctgtggagcaacagaga
agtcaagctctggaagctcatgctgctgcttttgcacaatttaaagttccagggaatgag
aatccttctactctcatttcctttgcgacaaagacttttaatgctgggcaaattacatca
aagttgcatgttatagagcttggtgcccaaccagggaaaccttcttttacaaagaaacaa
gcagatcttttctttcctccagattttgcagatgatttccctgttgcaatgcagatatca
cacaagtatagtttgatctacgtcatcaccaagcttgggcttctattcgtttatgatttg
gagacggctactgcagtttacagaaatagaatcagtccagatccaatcttcttaacatca
gaggcttcggcactaggtggattttacgcaattaacaggcggggtcaggtgttattggcc
actgttaatgaacaaacaattgtgccttttgttagtgggcagttgaacaatttggagctt
gctgtcaatctggcaaaaagaggaaatcttcccggtgctgagaatctggttgtccagcga
ttccaagaactgtttgcacaaacgaagtataaagaagctgctgaacttgctgctgaatct
cctcagggaatccttcgtactcctgatacagttgccaaatttcagagtgttcctgtacaa
agtgggcaaacaccaccccttttgcagtattttggtactctattgaccaggggaaagctt
aatgcttttgagtcattggagctatcacgtcttgttgtgaaccaaaacaagaagaatttg
ttggaaaattggttagcagaagacaagttagaatgcagtgaggagctaggagatcttgtg
aagactgtggacaatgaccttgcactgaaaatttatatcaaagccagagcaactccaaaa
gttgttgcagcctttgctgagcgaagagagtttgataagattctaatttattcaaagcag
gttgggtacacgccagactatctgtttcttttgcaaaccattcttcggacagatcctcag
ggtgctgttaattttgcattaatgatgtctcaaatggaaggaggttgccctgttgattac
aacaccataacagatttatttcttcagaggaatttaattcgtgaggctacagcttttcta
ttggatgttttgaagacaaatttaccagaacatggtttcctgcaaactaaggttcttgaa
atcaatttggttactttcccaaatgtagctgatgcaattttggccaatggaatgtttagc
cactacgatcgtcctcgaattgctcaactttgtgaaaagggtggtctttatgttcgagct
ctacaacattacacagagttgccagatattaaaagagtcattgtgaatacacatgctatt
gagccacagtctctcgtagaattttttggtactctttcacgagaatgggcattggagtgt
atgaaggaccttttattggttaatttaagaggaaatcttcagataattgttcaggttgct
aaggaatattgtgagcagttgggtgttgatgcttgtattaagctttttgagcagttcaaa
tcttatgaagggctgtactttttcttagggtcatatttgagctctagtgaggatcctgat
atccacttcaagtacatagaagcagctgctagaactggacaaatcaaagaagtagaacgc
gttacaagagagtcgaatttctatgaccctgaaaaaacaaagaatttcttaatggaagcc
aagctcccagatgcacgcccactgattaatgtttgtgatcgttttggatttgtccctgat
ctcacccactatttgtacacaagtaacatgctacggtacattgaaggatatgttcaaaag
gtgaaccctgggaatgcaccattggttgtgggtcaattgctagatgatgaatgtccagaa
gattttatcaaaggtttgattctttctgtacggtcattgcttccagtagagccccttgtg
gaggaatgcgagaaaaggaatcgacttcgtttgcttactcaattcttggagcatcttgtg
agtgagggaagccaagatgtgcatgtccacaatgctcttggtaaaatcattattgaaagc
aacaacaacccagagcacttccttaccaccaacccatactatgattctcgtgttgtgggt
aaatattgtgagaaacgtgatcctaccttagctgttgttgcttatcggcgaggacagtgt
gatgacgagctcattaatgtcacaaataaaaattctttgtttaaattgcaagcaagatat
gtggttgaaaggatggatggtgatctttgggagaaagttcttaaccctgaaaatggcttc
agaagacaacttattgatcaagttgtctctacagctttgcctgaaagcaagagcccagag
caggtttctgcagctgttaaggctttcatgactgctgatctaccccatgagttgattgaa
cttctcgagaagattgtgcttcaaaactctgctttcagtgggaactttaatcttcaaaac
ttacttattttgacagccattaaggcagatccatctagagttatggattacatcaatagg
ctggataatttcgatggacctgctgtgggagaagtggctgtggaagcacaactctttgaa
gaagcatttgcaattttcaagaagtttaacttgaatgttcaagctgtcaatgtcttactg
gataacattcgaagcattgaacgagctgttgagtttgcattccgagttgaagaagatgct
gtttggagtcaggttgcaaaggctcaactcagggaaggactagtgagtgatgcaattgag
tcatttattcgtgctgatgatgcgactcaattcctggatgttattcgtgctgctgaggat
gtaaatgtctatgatgacatggtgaggtaccttctgatggtgaggcaaaaggtgaaagag
ccaaaggtggacggtgaacttatatatgcatacgcaaagattgacaggctggctgatatt
gaagaatttattctcatgccaaatgtagctaatctccagagtgttggtgaccgcttgtat
gatgaagctctatacgaggcagcaaaaataatatatgcttttatatctaactgggctaag
ttagctgtcacacttgttaagttaaaacagttccaaggtgctgttgatgctgcaaggaaa
gccaatagtgcaaaaacatggaaggaggtctgctttgcctgtgtggatgcagaggagttc
cgattggctcaaatttgtgggcttaacattattattcaggttgatgacttggaggaggtg
agtgaattttaccagaacagaggatgcttcaatgaactgatatctctcatggagagtggc
ttaggattagaacgtgcacatatgggcatctttacagagttgggggttctgtatgccaga
tatcgtccagagaagctcatggagcatatcaaattgttctcaactcggctcaatattccc
aaacttatccgagcttgtgatgaacaacaacattggaaagaacttacttatttgtatatc
caatatgatgaatttgataatgctgcaacaactatcatgaaccattctcccgaagcgtgg
gaccacatgcagtttaaagatgtggcagtcaaggttgcaaatgttgagctatattacaag
gctgtgcacttctacttgcaagaacacccagatcttattaatgatcttctcaatgtgctt
gcacttcgagtggaccatacacgtgttgttgacattatgcgaaaggctggtcatttgcgc
ctggtgaagccttacatgattgcagtccagagcaacaatgtgtcagctgtaaatgaggct
ttgaacgagatttatgtcgaggaggaagactatgatagattgcgtgaatccattgatttg
catgatagctttgaccaaataggcctggcccaaaagattgagaaacacgagcttcttgaa
atgagacgagttgctgcctatatatacaaaaaggctggtcgatggaagcagtctattgca
ttgtcaaagaaggacaatctttacaaagatgccatggagacagcctctcaatctggtgac
cgtgaacttgctgaggaattgcttgtttatttcattgagcagggcaagaaggaatgcttt
gcatcatgtctctttgtttgttacgatttgattcgggcagatgtcatccttgagcttgca
tggatgaacaatatgcttgactttgctttcccttacctgttgcagtttatccgtgaatac
actggcaaggttgatgaactcgtgaaggacaaaattgaagctcttaacgaaaacaaggct
aaagaaaaggaagagaaggacgttattgcacagcagaacatgtatgctcagttgctgcct
cttgctttgcctgccccacctatgccgggaatgggaggaccaggaatgggaggctatgca
ccacctcctatggggggaatgggaatgcctccaatgccaccctatggcatgccacccatg
gggagcagctattga

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