Cannabis sativa (hemp): 115705029
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Entry
115705029 CDS
T08987
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
csav
Cannabis sativa (hemp)
Pathway
csav04142
Lysosome
csav04144
Endocytosis
csav05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115705029
04142 Lysosome
115705029
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
115705029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csav04131
]
115705029
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csav04147
]
115705029
Membrane trafficking [BR:
csav04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
115705029
Exosome [BR:
csav04147
]
Exosomal proteins
Proteins found in most exosomes
115705029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
115705029
NCBI-ProteinID:
XP_030488124
LinkDB
All DBs
Position
1:11117668..11129302
Genome browser
AA seq
1704 aa
AA seq
DB search
MAAANAPIAMREALTLPSVGISPQFITFTHVTMESDKYICVRETSPQNSVVIIDMSMPNQ
PLRRPITADSALMNPNSKILALKALVPGTSQDHLQIFNIELKAKLKSHVVPEQVVFWKWI
TPKLLGLVTQTSVYHWSIEGETEPVKMFERTANLANNQIINYRCDPTEKWLVLIGIAPGA
PERQNLVKGNMQLFSVEQQRSQALEAHAAAFAQFKVPGNENPSTLISFATKTFNAGQITS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYSLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTSEASALGGFYAINRRGQVLLATVNEQTIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
SGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKTNLPEHGFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKGGLYVRALQHYTELPDIKRVIVNTHAI
EPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAARTGQIKEVERVTRESNFYDPEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTSNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIES
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWEKVLNPENGFRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLFE
EAFAIFKKFNLNVQAVNVLLDNIRSIERAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLDVIRAAEDVNVYDDMVRYLLMVRQKVKEPKVDGELIYAYAKIDRLADI
EEFILMPNVANLQSVGDRLYDEALYEAAKIIYAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEFYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVL
ALRVDHTRVVDIMRKAGHLRLVKPYMIAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDSFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIEQGKKECFASCLFVCYDLIRADVILELAWMNNMLDFAFPYLLQFIREY
TGKVDELVKDKIEALNENKAKEKEEKDVIAQQNMYAQLLPLALPAPPMPGMGGPGMGGYA
PPPMGGMGMPPMPPYGMPPMGSSY
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctaacgctccgatcgccatgagggaagcccttacgcttccgagcgttggg
attagtcctcaattcatcacgtttacgcatgtcactatggaatctgataagtacatatgc
gtgagggaaacttccccgcagaatagtgttgttataatcgatatgagtatgccaaatcag
cctctgaggaggcctattactgcagactctgcactgatgaatcctaattctaaaatcctt
gcattgaaagctctagtcccggggaccagtcaagatcacttgcaaatatttaacattgag
ttgaaagctaaattgaagtcgcatgtagtgcctgagcaggttgtattttggaaatggatt
accccaaagttgttgggtctggttacacagacctcagtatatcattggtcaattgaaggt
gagactgaacctgtgaagatgttcgaaagaactgctaatctggcaaataatcagataata
aactatcgttgtgaccctactgaaaagtggttggttttgattggaattgcccctggtgcc
cctgagaggcaaaatttggtcaaggggaatatgcaactcttttctgtggagcaacagaga
agtcaagctctggaagctcatgctgctgcttttgcacaatttaaagttccagggaatgag
aatccttctactctcatttcctttgcgacaaagacttttaatgctgggcaaattacatca
aagttgcatgttatagagcttggtgcccaaccagggaaaccttcttttacaaagaaacaa
gcagatcttttctttcctccagattttgcagatgatttccctgttgcaatgcagatatca
cacaagtatagtttgatctacgtcatcaccaagcttgggcttctattcgtttatgatttg
gagacggctactgcagtttacagaaatagaatcagtccagatccaatcttcttaacatca
gaggcttcggcactaggtggattttacgcaattaacaggcggggtcaggtgttattggcc
actgttaatgaacaaacaattgtgccttttgttagtgggcagttgaacaatttggagctt
gctgtcaatctggcaaaaagaggaaatcttcccggtgctgagaatctggttgtccagcga
ttccaagaactgtttgcacaaacgaagtataaagaagctgctgaacttgctgctgaatct
cctcagggaatccttcgtactcctgatacagttgccaaatttcagagtgttcctgtacaa
agtgggcaaacaccaccccttttgcagtattttggtactctattgaccaggggaaagctt
aatgcttttgagtcattggagctatcacgtcttgttgtgaaccaaaacaagaagaatttg
ttggaaaattggttagcagaagacaagttagaatgcagtgaggagctaggagatcttgtg
aagactgtggacaatgaccttgcactgaaaatttatatcaaagccagagcaactccaaaa
gttgttgcagcctttgctgagcgaagagagtttgataagattctaatttattcaaagcag
gttgggtacacgccagactatctgtttcttttgcaaaccattcttcggacagatcctcag
ggtgctgttaattttgcattaatgatgtctcaaatggaaggaggttgccctgttgattac
aacaccataacagatttatttcttcagaggaatttaattcgtgaggctacagcttttcta
ttggatgttttgaagacaaatttaccagaacatggtttcctgcaaactaaggttcttgaa
atcaatttggttactttcccaaatgtagctgatgcaattttggccaatggaatgtttagc
cactacgatcgtcctcgaattgctcaactttgtgaaaagggtggtctttatgttcgagct
ctacaacattacacagagttgccagatattaaaagagtcattgtgaatacacatgctatt
gagccacagtctctcgtagaattttttggtactctttcacgagaatgggcattggagtgt
atgaaggaccttttattggttaatttaagaggaaatcttcagataattgttcaggttgct
aaggaatattgtgagcagttgggtgttgatgcttgtattaagctttttgagcagttcaaa
tcttatgaagggctgtactttttcttagggtcatatttgagctctagtgaggatcctgat
atccacttcaagtacatagaagcagctgctagaactggacaaatcaaagaagtagaacgc
gttacaagagagtcgaatttctatgaccctgaaaaaacaaagaatttcttaatggaagcc
aagctcccagatgcacgcccactgattaatgtttgtgatcgttttggatttgtccctgat
ctcacccactatttgtacacaagtaacatgctacggtacattgaaggatatgttcaaaag
gtgaaccctgggaatgcaccattggttgtgggtcaattgctagatgatgaatgtccagaa
gattttatcaaaggtttgattctttctgtacggtcattgcttccagtagagccccttgtg
gaggaatgcgagaaaaggaatcgacttcgtttgcttactcaattcttggagcatcttgtg
agtgagggaagccaagatgtgcatgtccacaatgctcttggtaaaatcattattgaaagc
aacaacaacccagagcacttccttaccaccaacccatactatgattctcgtgttgtgggt
aaatattgtgagaaacgtgatcctaccttagctgttgttgcttatcggcgaggacagtgt
gatgacgagctcattaatgtcacaaataaaaattctttgtttaaattgcaagcaagatat
gtggttgaaaggatggatggtgatctttgggagaaagttcttaaccctgaaaatggcttc
agaagacaacttattgatcaagttgtctctacagctttgcctgaaagcaagagcccagag
caggtttctgcagctgttaaggctttcatgactgctgatctaccccatgagttgattgaa
cttctcgagaagattgtgcttcaaaactctgctttcagtgggaactttaatcttcaaaac
ttacttattttgacagccattaaggcagatccatctagagttatggattacatcaatagg
ctggataatttcgatggacctgctgtgggagaagtggctgtggaagcacaactctttgaa
gaagcatttgcaattttcaagaagtttaacttgaatgttcaagctgtcaatgtcttactg
gataacattcgaagcattgaacgagctgttgagtttgcattccgagttgaagaagatgct
gtttggagtcaggttgcaaaggctcaactcagggaaggactagtgagtgatgcaattgag
tcatttattcgtgctgatgatgcgactcaattcctggatgttattcgtgctgctgaggat
gtaaatgtctatgatgacatggtgaggtaccttctgatggtgaggcaaaaggtgaaagag
ccaaaggtggacggtgaacttatatatgcatacgcaaagattgacaggctggctgatatt
gaagaatttattctcatgccaaatgtagctaatctccagagtgttggtgaccgcttgtat
gatgaagctctatacgaggcagcaaaaataatatatgcttttatatctaactgggctaag
ttagctgtcacacttgttaagttaaaacagttccaaggtgctgttgatgctgcaaggaaa
gccaatagtgcaaaaacatggaaggaggtctgctttgcctgtgtggatgcagaggagttc
cgattggctcaaatttgtgggcttaacattattattcaggttgatgacttggaggaggtg
agtgaattttaccagaacagaggatgcttcaatgaactgatatctctcatggagagtggc
ttaggattagaacgtgcacatatgggcatctttacagagttgggggttctgtatgccaga
tatcgtccagagaagctcatggagcatatcaaattgttctcaactcggctcaatattccc
aaacttatccgagcttgtgatgaacaacaacattggaaagaacttacttatttgtatatc
caatatgatgaatttgataatgctgcaacaactatcatgaaccattctcccgaagcgtgg
gaccacatgcagtttaaagatgtggcagtcaaggttgcaaatgttgagctatattacaag
gctgtgcacttctacttgcaagaacacccagatcttattaatgatcttctcaatgtgctt
gcacttcgagtggaccatacacgtgttgttgacattatgcgaaaggctggtcatttgcgc
ctggtgaagccttacatgattgcagtccagagcaacaatgtgtcagctgtaaatgaggct
ttgaacgagatttatgtcgaggaggaagactatgatagattgcgtgaatccattgatttg
catgatagctttgaccaaataggcctggcccaaaagattgagaaacacgagcttcttgaa
atgagacgagttgctgcctatatatacaaaaaggctggtcgatggaagcagtctattgca
ttgtcaaagaaggacaatctttacaaagatgccatggagacagcctctcaatctggtgac
cgtgaacttgctgaggaattgcttgtttatttcattgagcagggcaagaaggaatgcttt
gcatcatgtctctttgtttgttacgatttgattcgggcagatgtcatccttgagcttgca
tggatgaacaatatgcttgactttgctttcccttacctgttgcagtttatccgtgaatac
actggcaaggttgatgaactcgtgaaggacaaaattgaagctcttaacgaaaacaaggct
aaagaaaaggaagagaaggacgttattgcacagcagaacatgtatgctcagttgctgcct
cttgctttgcctgccccacctatgccgggaatgggaggaccaggaatgggaggctatgca
ccacctcctatggggggaatgggaatgcctccaatgccaccctatggcatgccacccatg
gggagcagctattga
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integrated database retrieval system