Cannabis sativa (hemp): 115705197
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Entry
115705197 CDS
T08987
Name
(RefSeq) YTH domain-containing protein ECT1
KO
K20102
YTH domain-containing family protein
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115705197
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115705197
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
RE_AspBHI_N
DUF1463
Motif
Other DBs
NCBI-GeneID:
115705197
NCBI-ProteinID:
XP_030488314
UniProt:
A0A803P3E5
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Position
1:50706144..50710647
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AA seq
567 aa
AA seq
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MAAPQFPKVQKQGEKKEALRVDNSFRLEPNHYSTTNLEGSPSESSITASMMEENHAYNHS
QAAYPSTTSYGYYYPGYNGSLGDFYNQGYYIAGNAMEQQYPVVQADSGSFVYMMPGLYPG
YDPYTPYMPVSTITVDGQYVGQEVYPPSPMFQSPVPSPEYGTTHHGDPLQAPYLWSSSLV
GDGTYENGYVGLLEIPAAKTDFSVPVVPRAQPPKSSKLAGSVNLSPDVLSGQTKKLKPLN
KASSHTPSFQSDLPAQGYYTVAKFPVYGQGKSGLLYSNNSVNLKPNVKGWGGSEKLKARS
KVNGVSHVTLLNDKNNDTVNAKSALRFGGNASQSLATDEVGNGVSITSSIRRDEYNIPEF
STKYDHAYFFVIKSYSEDDIHKSIKYNVWASTPNGNKRLNDAYQEAQERMTEKGSKCPVF
LFFSVNASGQFCGVAEMTGPVDFNKSMDFWQQSKWSGYFPVKWHIIKDVPNAQLRHIILE
NNENKPVTNSRDTQEVKFHQGIEILNILKNYALNTSILDDFEFYENRQKIMQEKRVRQSV
PNHDLQRKVEDLTASFQAVDLSAAKTT
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcctcaatttccaaaagttcaaaaacaaggggagaagaaagaagctctcaga
gttgataatagctttagattggaacccaatcattattccaccaccaacctggaaggaagt
ccttctgaatcttctataacagcctccatgatggaagaaaaccatgcctataatcattct
caggctgcttatccaagcacaacctcttatggttactactatccaggttacaatggctct
cttggagatttttacaaccaaggatactacattgctgggaatgcaatggagcaacaatac
cctgttgtgcaagcagatagtggatcctttgtttacatgatgcccgggctctatcctgga
tatgatccttatacaccttacatgcctgttagtactatcactgttgatgggcaatatgtt
gggcaagaggtctacccaccgagtcccatgtttcagtctcccgttccttcacctgaatat
ggtacaactcatcacggggatccactgcaggcaccctacctttggagttcatctcttgtt
ggtgatggaacttatgaaaatggttatgttggattgttggaaattccagctgccaaaact
gatttctctgttccagttgttccgagggcccaaccaccgaagtcttctaaacttgcaggc
tcagtcaatctttctcctgatgttttatcaggtcaaaccaagaagctaaaaccattaaac
aaggcctcatctcataccccaagttttcagtcagatttacctgcccaaggttactataca
gttgcaaaatttcctgtgtatggtcaagggaagagtggtttgctctactcaaacaactca
gttaatttgaaaccaaatgttaagggatggggaggcagtgaaaagttaaaagcaagaagc
aaggttaacggtgttagtcacgttactttactcaatgacaagaataatgatacagttaat
gcgaagagtgcattgaggtttggaggtaatgcttctcaatccttggctactgatgaggtt
ggaaatggtgtcagcataacctcttcaataaggagagatgaatataacattcctgagttt
tcgaccaaatatgatcatgcctacttctttgtaattaaatcgtacagtgaagatgatatt
cataaaagcattaagtacaatgtttgggctagcacacccaatgggaataagaggttgaat
gatgcatatcaagaagcacaagagaggatgacagagaaaggcagcaagtgtcctgtgttc
cttttcttttcggtaaatgctagtggtcagttctgtggggtagctgaaatgactggaccg
gtggatttcaataagagtatggatttctggcaacagagcaagtggagtggttattttccg
gtcaagtggcatatcattaaagatgttccaaatgcgcaattacgacacataatacttgag
aataatgagaacaagcccgtaacgaatagtagagatactcaagaggtgaaattccatcaa
ggtatcgaaatcttaaatattctcaaaaattatgctttaaacacttccatattagacgac
tttgaattttacgaaaaccgtcagaaaattatgcaagagaaaagggtcaggcaatctgtg
cctaatcatgatttgcagcggaaggtggaagatttaaccgcgagttttcaggccgtagat
ctttctgctgcaaaaaccacctga
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