Cannabis sativa (hemp): 115705223
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Entry
115705223 CDS
T08987
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein kinase VPS15
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
115705223
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csav01001
]
115705223
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csav04131
]
115705223
Enzymes [BR:
csav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
115705223
Protein kinases [BR:
csav01001
]
Serine/threonine kinases: Other
VPS15 family
115705223
Membrane trafficking [BR:
csav04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
115705223
Autophagy
Autophagosome formation proteins
PI3K complex
115705223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
HEAT
NBCH_WD40
EIF3I
Beta-prop_TEP1_2nd
PK_Tyr_Ser-Thr
Beta-prop_TEP1_C
Beta-prop_EML_2
APH
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Cohesin_HEAT
TCAD9
YopX
Beta-prop_Vps41
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
115705223
NCBI-ProteinID:
XP_030488351
LinkDB
All DBs
Position
1:complement(14142304..14149324)
Genome browser
AA seq
1553 aa
AA seq
DB search
MGNKIARTTQVSASEYYLHDLPSSYNLVLKEVLGRGRFLKSILCKHDEGLVLVKVYFKRG
DNIDLREYERRLFHIKETLRGLEFPHVWPFQFWQETDKAAYLLRQYFFNNLHDRLSTRPF
LSLVEKRWLAFQLLLAVKQCHEKGVCHGDIKCENVLVTSWNWLYLVDFASFKPTYIPYDD
PSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVAQDAPLRPSMDIFAVGCVIAELFLEGQP
LFELSQLLAYRRGQYDPSQLLEKIPDSGIRKMILHMIQLEPESRLSAANYLQDYMTIVFP
SYFSPFLHNFFCFWNPLNSDMRVVLCQSFFHEILKQMMSTRSTEGNGTGLAMIPKENTES
GIQSEEMIAKQNPTLEKESSLKRDEIDKGLNSEHIETLGDINSLLRDVKKSNHYSGNKPI
LEDVHSSELSQNFRNYGMQSPGELLQTISSAFRRNDHPFMKKITLNDLNLLMSKHDSQTD
TFDVPFLPLPEDGMTCEGMVLITSLLCSCIRNVKLPHLRRRAILFLKCSALYIDDEDRLQ
RVLPYVIAMLSDSAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEE
SVRICYASNIAQLALTAYGFLIHSISLSEAGVLDEQKPIQSSSRSSGRLQRANSDAQLAQ
LRKSIAEVVQELVMGPKQTPNIRRALLQDISNLCCFFGQRQSNDFLLPILPAFLNDRDEQ
LRTVFYGQIVYVCFFVGQRSVEEYLLPYIEQALIDTTEAVIVNALDCLAILCKSSFLRKR
ILLEMIERAFPLICYPSQWVRRLAVTFIGASSESLGAVDSYVFLAPVIRPFLRRQPSSLA
SEKALLSCLKPPVSRQIFYQVLENARSSDMLERQRKIWYNSSPQSKQWETLDLLQKVVAD
FNPAKSWPDKQQNYESSMPAFNSMQQAERSEYDDGEAKLRTMGSLIHNSSSAVELYDPLS
SEKLQFSGFMMPQGSGVNSFMGDKPSEGIPLYSFSMDKRAAGNPSAASDSLLQVNSGGFG
ASSLPWMDPSNKSFSLASSVPAPKLVSGSFSISSGSKQFYRVVHEPDGRENDQTSYVSTK
FQDMGLSSSAKGGSVPLEVASSQTELTGLPSFTRTSSISDSGWRPRGVLVAHLQEHRSAV
NDLAISTDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCATMLRGSAQV
VVGACDGMIHIFSVDYITRGLGNVVEKYSGIADIKKKDIKEGAILSLLNHSTDNTASQTV
MYSTQNCGIHLWDTRTSSNSWTLNSVPENGYVSSLVTGPCGNWFVSGSSRGELTLWDLRF
LIPVNSWQYPLVCPIEKMCLFVPPPNASTSTAVRPLVYVAAGCNEVSLWNAEDGICHQVL
KVANYDSDAEMSDILWALGKPLSRGNSKPDVRRNVNPKYRVNELQEPPPRLPGIRSLIPL
PGGDLLTGGTDLKIRRWDHCSPDRSYSVCGPNGNEVVNDEFFKTSSNFGAQIVQEKKRRL
PSAGKNSAKTVLTAAATDTAGCHRDSILSLASVKLNQRLLISSSRDGAIKVWK
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacaagattgctcgtacgacccaagtctcggcttccgagtactacctccacgac
cttccttcttcctacaatttagtcctcaaggaggttctagggcgtggtcgcttcctcaag
tcgattctctgcaagcatgacgagggtttggtactcgtcaaggtatatttcaagcgtggc
gacaatatcgatcttcgggagtacgaacgccgtctctttcacatcaaggagacattacgt
ggccttgaattccctcacgtctggccatttcagttctggcaagaaactgataaagcagcc
tatcttttgaggcaatacttcttcaataacctgcatgatcgattaagtacgcgtcctttt
ctgagtctcgtagagaagagatggttggcctttcagctacttcttgccgtgaaacaatgc
catgagaaaggagtttgccacggtgatattaagtgcgagaatgttcttgtcacttcctgg
aactggctttaccttgtggactttgcatcattcaaaccaacttacattccctatgatgac
ccttctgatttctcgtttttctttgataccggaggaagaaggctttgttatcttgctccc
gagagattttatgagcatggaggcgagatgcaggtcgcacaagatgcacctttaaggcct
tctatggacatctttgctgtagggtgtgtaattgcagagctttttcttgagggtcagcca
ctatttgaactctctcaacttcttgcttatcgcagagggcaatatgatcccagtcaactt
cttgaaaagatccctgattctggaatccgcaaaatgattcttcatatgattcagttggaa
ccagagtcacgactttctgctgctaactatctgcaggattatatgaccattgtgtttcca
agctatttctctccgtttctgcataacttcttctgcttctggaatcctcttaattctgat
atgagggttgttctgtgccaaagctttttccatgagattctgaagcaaatgatgagcact
aggtctactgaagggaatggtacaggactggctatgattccaaaagaaaacactgaaagt
ggtatacaatctgaagagatgattgcaaagcagaacccaactttggaaaaggaatcgtcc
ttaaagagggatgaaatagataaaggtttaaatagtgaacatattgaaactcttggtgat
atcaattccctgctgagagatgtaaaaaaaagtaatcactattctggtaataagcctatc
cttgaagatgttcatagttctgaactttcccaaaattttaggaactacggcatgcaatct
cctggtgagctacttcaaaccatttccagtgcattcaggagaaatgatcacccctttatg
aaaaagattacgttgaatgatttgaatttgttaatgtccaagcatgacagccagacagat
acctttgatgtgccttttttgccacttcccgaagatggtatgacatgtgagggcatggtt
ttaattacctctcttctatgttcctgcatacgcaatgtcaagttaccacatttaaggagg
agggcaatactctttcttaagtgctctgcattatacattgatgatgaggatcgcttgcaa
cgagtgcttccatatgttattgcaatgctttctgattcagcagcaattgtacgttgtgca
gccttggaaactttgtgtgacatcctgcctttagtccgagattttcctcctagtgatgcg
aaaatatttcctgaatacattcttcccatgctttccatgcttcctgatgacccagaggaa
agcgtgagaatatgttatgcaagcaatattgctcaattagcactaacggcttatggtttc
ttaattcattcaataagcttgagtgaggctggggttcttgatgaacagaagccaattcaa
tcatctagtagatcttctggtcgtctacagagggctaacagtgatgcacaacttgcccaa
ttaaggaagtctatagctgaggttgttcaagaacttgttatgggtccaaagcaaactcca
aatatcaggagagcactccttcaggacattagcaacctatgctgcttctttggccagaga
cagagtaatgattttctcttacctatcctccctgcttttctaaatgaccgggatgaacaa
ctaagaacagtattttacggacaaattgtgtatgtctgcttctttgtgggtcaaagaagt
gtagaggagtatcttttaccttacattgagcaggctttaattgatactacggaggctgtc
attgtcaatgcattggattgtttggccattctatgcaaaagcagttttctaaggaagagg
atactcctcgaaatgatagagcgtgcctttccattgatatgttatcctagtcaatgggta
cgaaggttagctgtcactttcattggtgctagtagtgaaagtttaggtgcagtagattct
tatgtcttccttgcccctgttatccggccattcctgcggagacaaccatcatcactagct
tctgaaaaagctctactttcatgtttaaagcccccagtctcaagacagatattttaccaa
gtcttagaaaatgccaggagttcagacatgcttgaaagacaaagaaagatatggtacaat
tcatcaccacaatcaaaacaatgggaaactttggatttacttcagaaagtggttgctgat
tttaatcctgcaaagagttggcctgacaagcaacaaaattatgaaagctcaatgcctgca
ttcaattcgatgcaacaagctgagcggagtgaatatgatgatggtgaggctaagttgaga
actatgggaagcttaatacacaattcttctagtgctgttgaactttatgatcccttgagt
tctgaaaagttgcaattctcaggttttatgatgccacaaggaagtggtgtgaatagtttt
atgggagataaaccatcagaaggaatacccttgtactcctttagcatggacaaacgggca
gcgggaaatccttctgcagcatctgattctctgttacaagtgaactctggtggatttggt
gcatcgtccttgccttggatggatccttcaaataaatcatttagcttggctagttcagtt
ccggcacctaagcttgtgtcaggttctttcagcataagcagtggatctaaacagttctac
agagttgtacatgaaccagatggccgggaaaatgatcaaacatcatatgtcagtaccaag
tttcaagatatgggattatctagttctgcaaaaggaggttctgttcccttggaagttgcc
tcctcccaaactgaactaacaggattgccatcttttacacgaacatcatcaatttcagat
tcagggtggaggcctcgtggggtattggttgctcaccttcaggagcatcgctctgctgtc
aatgacctagctatttcaactgatcatagtttttttgtgagtgcatctgatgattctacg
gtcaaggtatgggattcaaggaagttggagaaggacatttcattcaggtcaaggttaact
tatcacctagagggaagccgggccctatgtgccacaatgctccggggttctgctcaagtt
gtagtaggagcatgtgatggtatgatccatatattttctgttgattacatcaccaggggt
cttggtaatgttgttgagaaatattctggtattgccgatatcaaaaagaaggatatcaag
gaaggtgccatacttagccttttgaaccactccactgataacacagcaagtcagacagtt
atgtacagcacccaaaattgcgggatccatctttgggatacaagaacaagttcaaattcc
tggactttaaactcagttcctgaaaatggctatgtatcttctttggtcacaggtccttgt
ggtaattggtttgtctcaggatcttcaaggggtgaacttactctttgggatcttagattc
ttgatacctgtgaactcttggcagtaccctcttgtgtgccctattgagaagatgtgcctt
tttgttcctcctccaaatgcatctacatctactgctgtaaggccccttgtctatgttgct
gcaggttgcaacgaagtttccctttggaatgcagaggatggaatttgccaccaggtcttg
aaggtagcaaactacgacagcgatgctgaaatgtcagacattctttgggccttgggcaaa
ccactaagtcggggaaattctaaaccggacgtgaggcgtaatgtcaaccccaagtacaga
gttaatgaattgcaagaacccccaccacgtcttcctggtattcgttcactgattccctta
cctgggggtgatttgttaactgggggtactgacttgaagattcgtcgatgggatcattgc
agtcctgatcgaagttactctgtatgtgggccaaatggaaatgaagttgtgaatgatgaa
ttctttaaaacaagttctaattttggggcgcaaattgtacaggagaaaaagagacgactt
ccttcagcaggtaagaactcagccaagacagttctgactgctgctgctactgatactgct
ggctgtcatcgtgattccattctctcattggcttctgtcaaactcaatcaaagactctta
atatcaagcagtagagatggagctatcaaggtctggaagtga
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integrated database retrieval system
