Cannabis sativa (hemp): 115705405
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Entry
115705405 CDS
T08987
Name
(RefSeq) sm-like protein LSM1B isoform X2
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115705405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115705405
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115705405
mRNA degradation factors
5'-3' decay
Lsm complex
115705405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
115705405
NCBI-ProteinID:
XP_030488600
LinkDB
All DBs
Position
1:21330585..21332684
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AA seq
146 aa
AA seq
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MVFGGFFQYLNRKIIAPSMSLAASDDIFLSTSLASYLDKKLLVLLRDGRKLLGLLRSFDQ
FANVILEGACERAIVGDIYCDIPLGLYVIRGENVVLIGELDLDREELPPHMTQVSEEEIK
RAQKVEKDASDLKGTMRKRMEFLDFD
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atggtttttggtggcttttttcagtacctaaatagaaagattatagctccatccatgtct
ttggctgcctccgacgacattttcctttccacttcactcgcaagctatcttgataagaaa
cttcttgtgttgttgagagatgggagaaagcttttgggtttactgagatcttttgatcag
tttgctaatgtaattcttgaaggtgcttgtgaacgagctattgtgggtgatatttactgt
gatatcccattaggtctatatgtaattcgaggtgaaaatgtggtgttgattggagagctg
gacttggatagggaggagcttcctccacatatgactcaggtctcagaagaagagataaaa
agggctcagaaagtagaaaaggatgctagtgatcttaagggtaccatgagaaagagaatg
gagtttcttgattttgattaa
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