KEGG   Cannabis sativa (hemp): 115705405
Entry
115705405         CDS       T08987                                 
Name
(RefSeq) sm-like protein LSM1B isoform X2
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    115705405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csav03019]
    115705405
Messenger RNA biogenesis [BR:csav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     115705405
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     115705405
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 115705405
NCBI-ProteinID: XP_030488600
LinkDB
Position
1:21330585..21332684
AA seq 146 aa
MVFGGFFQYLNRKIIAPSMSLAASDDIFLSTSLASYLDKKLLVLLRDGRKLLGLLRSFDQ
FANVILEGACERAIVGDIYCDIPLGLYVIRGENVVLIGELDLDREELPPHMTQVSEEEIK
RAQKVEKDASDLKGTMRKRMEFLDFD
NT seq 441 nt   +upstreamnt  +downstreamnt
atggtttttggtggcttttttcagtacctaaatagaaagattatagctccatccatgtct
ttggctgcctccgacgacattttcctttccacttcactcgcaagctatcttgataagaaa
cttcttgtgttgttgagagatgggagaaagcttttgggtttactgagatcttttgatcag
tttgctaatgtaattcttgaaggtgcttgtgaacgagctattgtgggtgatatttactgt
gatatcccattaggtctatatgtaattcgaggtgaaaatgtggtgttgattggagagctg
gacttggatagggaggagcttcctccacatatgactcaggtctcagaagaagagataaaa
agggctcagaaagtagaaaaggatgctagtgatcttaagggtaccatgagaaagagaatg
gagtttcttgattttgattaa

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