Cannabis sativa (hemp): 115705563
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Entry
115705563 CDS
T08987
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 1
KO
K03255
protein TIF31
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
csav03012
]
115705563
Translation factors [BR:
csav03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
115705563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_9
TPR_MalT
TPR_8
Motif
Other DBs
NCBI-GeneID:
115705563
NCBI-ProteinID:
XP_030488790
LinkDB
All DBs
Position
1:complement(26189291..26201266)
Genome browser
AA seq
1854 aa
AA seq
DB search
MAPKNNRGKARGEKKKKEEKILPVVMDMTVNLPDETHVILKGISTDRIIDVRRLLSVNIE
TCNITNFTLSHEVRGPRLKDTVDVAALKPCILTLVEEDYDDETATAHVRRVLDLVACTTS
FGASPAGKDQNTKPDASVSVGGGKGASGAQEKNSKKFTITKSQGSSGPTKQDVAVVDSEA
DLSHSCPKLGAFYEFFSLSHLTPPLQFVKKVMRRQIDEISADDHLFSMEVKLCNGKVVHV
EACRKGFYSVGKQRILCHNLVDLLRQLSRAFDNAYEDLMKAFSERNKFGNLPYGFRANTW
LVPPFAAQSPPVFPPLPVEDETWGGNGGGLGRDGKSDLIPWANEFAFVASMPCKTPEERQ
VRDRRAFLLHSLFVDVSIFRAIKAIRLAMDKPDLIFPAVDSKILYIENVGDLSITVLKDV
SNASSKIDTKIDGLQAFGVDKEHLVERNLLKGITADENTAAQDVATLGVVNVRYCGYIAV
VKVEGKDEKATSPYQSSEFLDQPEGGANALNISSLRLLLHRTPASEHNKPTSDSQTWDLE
ELSASRAFVEKLLEESLAKLEQEDVKLDQFVRWELGACWIQHLQDQKNADKDKKPSTEKA
RNEMKVEGLGTPLRSLRNKKKVDGSNVKMQLEKPDGITAEAEGATSPSIEFNVEISGKEN
ELALKRLLSDEAFVRLKESDTGLHCKSLQELIDLCQKYYLEVALPKLVADFGSLELSPVD
GRTLTDFMHTRGLRMRSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHILQAVISAVEDNEK
MAVSIAATLNLMLGIPGKDEFDKSCHVHSLVWRWLEVFLRKRYDWDLSSFNYKDLRKFAI
LRGLCHKVGIEVVPRDFDMDSPNPFGKSDVVSLVPVHKQAACSSADGRQLLESSKTALDK
GKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINE
RELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVA
MMEEGLGNVHIALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQT
TLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHLSVSDLL
DYINPNHDGKGRDVVARRKNNFKLKGKSYQTVSTASSDESPKETPKETSDEETPIIEPLI
DPDVSQETTSAPVEPQLSVSEEATVEKPNVSTEASSDDLAEGEGWQSVQRPRSANSYGRR
LKQRRATIGKVLTYQKKYVDNEIEYPVAKNNAQNSRYYLLKKRTMSHGGYTDQHTVNPSQ
GTRYGRRIVKAVAYRVKSMPSSTKPATPDTSRNSGSGLGSPVEPDRNASLNETNSLKNPI
VSLGKSPSYKEVALAPPGSIAKMQVGMPQNVQENLERDVEKHEEETNETIRNVDPIVTGV
ENILEEKNDISSHRLPEETKVVITEDQTHSTNSIDENSSLRVFESLDGLRRSSVEVREVV
EDSVLIDGLQTSFAVPEVGLCEKNPSSSFELQVNSNPNFPATEELRDKSSAVNSVDTRTL
TNKKLSASAAPFNPSPGIARAAPVSMNITLPVGPGGVPTIAPWPVNMNLHPGPVISPVNP
MCSSPHHPFPSPPTTPNMMQPLPFMYPPFTQPQSSTFPVTSSAFHPNHFPWQCNMNLNVP
EFVTGPVWHPVEFSVPTPVVEPITDPVLEPRVQPGDSAPMLPVDIDNMVEVKREVNLQAS
EAVGNMNVVGSENVKENGPQKLVGPENAENEPNNISNGKPGSSDVSKMDGEKTFSILIRG
KRNRKQTLRMPVSLLSRPYGSQSFKVIYNRVVRGSDPPKSTSFSPSEECPASAT
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaagaacaaccgtggaaaggccaggggagagaagaagaagaaagaagaaaag
attcttcctgttgtcatggatatgactgtgaaccttcctgacgaaacccatgttatttta
aagggaatatcgacggacagaatcatcgatgttcgccgattgttatcggttaacatagaa
acttgtaacatcactaatttcacgctatcccatgaggtaagggggccccgcttaaaagat
acggtggacgttgctgcactgaaaccctgtattctaacgttggtggaagaggattacgat
gacgaaaccgctacggcgcatgttagacgagtgctggacctcgttgcctgtacgacgagc
ttcggtgcttcgccggccggaaaggaccagaacactaagcccgatgcttcggtttcagtt
ggcggtggtaaaggtgcgtcgggtgcgcaggagaagaattccaagaaattcaccatcacc
aagtctcaaggttcttcaggacccaccaaacaagatgtggcggtggtggattcagaggcc
gatttgagccactcgtgtcctaagcttggcgccttctatgagttcttctctctttcccac
ctcactcctccactgcaatttgtaaagaaagtgatgagacggcaaatcgatgagatttcg
gcggatgatcatcttttctctatggaagtgaaactttgcaatggaaaagttgttcacgtg
gaagcttgcaggaaagggttctacagcgttgggaagcagagaattctgtgtcacaatctc
gttgatttgttacgacagcttagtagagcttttgacaatgcttacgaagatcttatgaaa
gcattctcagaacgtaacaagtttgggaatcttccttatggctttagagccaacacatgg
cttgtaccaccctttgcagcccagtcgccaccagttttccctccgctccccgtagaggat
gaaacgtggggaggaaatggtggtgggttaggaagagatggaaaaagcgacctcattcct
tgggccaatgagtttgcttttgttgcatctatgccttgcaagactcccgaggaaaggcag
gttcgggataggagggcattccttcttcacagcctatttgttgatgtctccattttcaga
gccattaaagccattcgtcttgcaatggacaaaccagatttgatctttccagctgtggac
agtaaaattctgtatattgaaaatgttggggacttgagcatcacagtattgaaagatgtt
tcaaatgcaagcagtaagatagatactaaaattgatggacttcaagcatttggagttgat
aaggaacatctagttgaaagaaatcttctgaaggggattaccgctgatgaaaataccgct
gctcaggacgttgccactctgggggttgtgaatgtaagatattgtggttacattgcagtt
gtgaaagttgagggtaaggatgagaaagccacatctccatatcagagcagtgaatttctt
gatcagcctgaaggtggtgccaatgcccttaacattagcagtttgagattactactgcat
agaacaccagcttcagaacataataagcctacatctgattcgcaaacatgggatcttgaa
gagctttctgcttcccgtgcttttgttgagaaactgttagaagaaagtcttgcgaaactg
gagcaagaggacgtaaagttggatcaatttgtaagatgggaacttggagcctgctggata
caacacttgcaggaccaaaaaaatgcggacaaagataagaaaccatccactgagaaggct
aggaatgagatgaaggttgagggacttgggacacctcttaggtcgctaaggaacaagaag
aaagtagatggaagcaatgtgaaaatgcaactcgagaaaccggatggcattactgcagaa
gcagagggtgccacatcaccttctatagaatttaatgttgaaatcagcggcaaagaaaat
gagcttgctctgaagaggttgctgtctgatgaagcctttgttcgactgaaagaatctgat
actgggcttcattgcaagtctcttcaagaactaattgatttatgccagaagtattatttg
gaagttgctcttcccaaactggtagcagattttggttctttagaactttcaccagttgat
ggtcgaactttgactgatttcatgcatactaggggtctacggatgcgttctctgggacat
gttgtaaagctttcagaaaagctatctcatgtgcagtcactttgcattcatgaaatgatt
gtaagagcttttaagcacattcttcaagcagtaatttctgctgttgaagacaatgagaaa
atggctgtatctatagctgctacattgaatctgatgcttgggattcctggaaaagatgaa
tttgataagtcttgccatgtccattctctcgtgtggagatggcttgaagtattcttgaga
aagcgatatgactgggatcttagtagcttcaattacaaagacttgaggaaatttgcaatc
ttacgcggtctatgtcacaaggttggtattgaggtagttccaagggattttgacatggat
tctccaaacccattcggaaagtcggacgtggtcagcctagttccagtgcacaagcaagct
gcatgctcttctgcggatgggaggcagctactagaatcttcaaaaactgctttggataaa
ggaaaacttgaagatgcagttacatatggaacaaaggctcttgcaaagcttgtagcagtt
tgtggtccataccatcggatgactgcaggagcttacagccttcttgcggtagttttgtat
cacactggagacttcaatcaggctacaatttatcaacaaaaagccctggatataaatgag
agagaattaggacttgatcatccagacacaatgaagagttatggggatcttgctgtgttc
tattacagacttcagcatacagagctagctctcaaatatgttaagcgtgctctgtatctt
ctgcatctgacatgtggtccatctcatccaaacactgctgcaacgtacattaatgtggct
atgatggaagaagggcttggaaatgtgcatattgccctgagatatcttcacaaagctctg
aaatgtaaccaaaggttacttgggcccgaccatattcagacagcagcaagttaccatgca
attgcaattgctctctcattaatggaagcataccctttgagtgttcaacatgagcagaca
accctgcaaattctgcgagcgaagcttggtcctgatgatctgcgtacacaggatgctgct
gcctggcttgaatactttgagtcgaaggcttttgaacaacaagaagctgcacgaaatgga
acccggaagcctgacgcctctatagccagcaaaggccaccttagtgtatccgatttgctt
gattacattaatccaaatcatgatgggaaaggcagggatgtggttgccaggaggaaaaac
aactttaagttgaaaggaaagtcttaccaaactgtcagcacagcaagttctgatgagtct
ccgaaagaaacaccaaaagagacttcagatgaagagacacctattattgaaccactaatt
gacccagatgtcagccaggagaccacgtctgcacctgttgagcctcagctatctgtttca
gaggaggctactgtcgaaaagccaaatgtttccaccgaggcatcttctgatgatcttgct
gaaggagaaggatggcaatcagttcaaaggcctagatcagctaactcatatgggcgacgt
cttaagcagaggcgggcaactattggcaaagtccttacttaccagaagaaatatgtggac
aatgagattgagtatcctgtagcaaagaataatgctcagaatagtaggtattacctttta
aagaaaaggacaatgtctcatggaggttatacagatcagcatactgtcaatccctcccag
ggtactaggtatggtcggagaatagtgaaggctgtagcctacagggtcaagtcaatgcct
tcatcaactaaaccagctacaccagacacgtctagaaatagtggctcgggtttgggttcg
ccagtagaacctgaccgaaatgcttcactaaatgagaccaatagcctgaaaaatcctata
gtcagtcttggaaaatctccttcatacaaggaagtagctttggctccaccaggtagtatt
gcaaagatgcaagttgggatgccccaaaatgttcaagaaaaccttgaacgtgatgttgaa
aaacatgaagaggaaacaaacgaaaccattagaaatgttgatccaatagttacaggtgta
gaaaatatacttgaagagaagaatgatatttcttcacatcgtttaccagaggaaacaaaa
gttgtgataacagaagatcagactcattcaactaattcaatcgatgaaaactcttctttg
agagtgtttgagagcctggatggacttcgacgcagcagcgttgaagttcgtgaagtggtg
gaagatagtgttctcattgatgggttgcaaacttcttttgctgtgccagaagtgggactg
tgtgagaagaacccgtccagcagttttgaactccaggttaattcaaaccccaactttcca
gcaacagaggagttgagggacaaatcttctgctgtaaattcagttgatacacgcacactt
acaaataagaagttgtcagcatctgcagctcctttcaacccttcaccaggcattgcacgt
gctgctcctgtttccatgaacattactcttcctgttggtcctggtggtgttccaactatt
gctccctggccagtaaacatgaatcttcacccagggcctgtcatatcccctgtgaatcca
atgtgctcctctcctcatcatccattcccatctcctccaacaaccccaaacatgatgcag
ccattgccctttatgtaccctccttttactcaaccacaaagcagtaccttcccggtaaca
agcagtgcgtttcatcccaaccatttcccatggcaatgcaatatgaacctgaatgtacca
gaatttgttactggtccagtttggcatcctgtggagttctctgttccgacacctgttgtt
gagccaattactgatcctgtattggagccaagagtacagcctggtgattctgctccaatg
ttgccagtagacattgacaatatggtggaggttaagagagaagtgaatcttcaagcatca
gaggcagtgggtaacatgaatgtagttgggtctgagaatgtaaaggaaaatggtcctcag
aagctggtaggacctgaaaatgctgaaaatgaaccaaataacatcagtaatggaaaacct
ggaagcagtgatgtaagcaagatggatggtgaaaaaaccttcagcattttgattagaggg
aaaagaaaccgtaagcagactctacgaatgcctgttagtttactcagtcgaccatatggc
tcacagtccttcaaagttatatacaatagagtagtcagagggagtgatcctcccaagtca
accagcttttctccaagtgaagaatgcccagccagtgctacgtag
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