Cannabis sativa (hemp): 115705608
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Entry
115705608 CDS
T08987
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115705608
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csav01007
]
115705608
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csav03016
]
115705608
Enzymes [BR:
csav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
115705608
Amino acid related enzymes [BR:
csav01007
]
Aminoacyl-tRNA synthetase
Class I (U)
115705608
Transfer RNA biogenesis [BR:
csav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
115705608
Prokaryotic type
115705608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
115705608
NCBI-ProteinID:
XP_030488847
LinkDB
All DBs
Position
1:28678057..28688324
Genome browser
AA seq
1092 aa
AA seq
DB search
MFGHGPHIRVLGKPQITVPFFTKLTLSHLRRSLGPFLPHSFSSQTKPVEMEKKIEIEDPE
KKKKKEEKAREKELKKQKALEKAAKLQAQASNAPKKSEKKNVKRTTEEENSADFIDPVTA
SGEKKNMSPQMAKQYNPTAVEKSWYSWWEESRFFVADSSSSKPPFTIVLPPPNVTGALHI
GHALTAAIEDTIIRWRRMGGYNTLWVPGMDHAGIATQVVVEKKLMRERKLTRHDLGRENF
VSEVWKWKNLYGGTILQQLRRLGASLDWSRECFTMDEKRSKAVIEAFVRLYKEGLIYRDI
RLVNWDCTLRTAISDLEVEYEDIKERTLRKVPGYEKPVEFGVLTSFAYPLEEDLGEIVVA
TTRVETMLGDTAIAVHPDDERYRHLHGKFAIHPFNGRRIPIVCDGILVDPKFGTGAVKIT
PAHDPNDFEVGKRHNLEFINIFTDDGKINGNGGAEFVGMPRFKAREAITEALKMKGLYKE
AKMNEMRLGSCSRSNDVVEPLIKPQWYVNCGGMAKESLDAAVDDENRKLGFFPKQYIAEW
KRWLENIRDWCISRQLWWGHRIPAWYVILEDDDLKEVGAYNDSNHWVIARNEEEAQEQAS
SRYNGKKFQLFQDPDVLDTWFSSGLFPLSVLGWPENTGDLKTFYPTSVLETGHDILFFWV
ARMVMLGIKLGGSVPFSKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGVSLLDLHKRLE
EGNLDPNELVVAKEGQVKDFPNGITECGADALRFALVTYTAQSDKINLDIQRVVGYRQWC
NKLWNAVRFAMSKLGDNYTPPSNVKSNVLPFSCQWILSALNKAIAKTVSSLELYEFSDAA
TAVYAWWQYQLCDVFIELIKPYFAGNDPKFASERSFAQATLWLCLDNGLRLLHPFMPFVT
EELWQRLPSPKDHERAASIMISEYPSVVEDWTNERVEYEMDVIENSVKSLRSLAKESRER
RPAYVHCRTSPVKEIINNHELEIVTLANLSTLTVFSETDAAPAGCAVSVVNENISVYLDL
RGSLSAEAEREKLVKKMEEVQKQKEKLWKKMTASGYKDKVPAKIQEDNEAKLKSLEQEFS
ALALASEHIKET
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgtttggacatggaccccacattagggttttaggcaagccgcaaattacagtccctttc
ttcaccaaacttactttatctcatctccgacgatctctcggaccttttcttcctcattct
ttctcctcgcagactaagccggtggaaatggagaagaagattgagattgaagatcctgag
aagaagaagaagaaggaggagaaggcaagagagaaagaattgaaaaagcaaaaggcttta
gagaaggctgccaagcttcaggcacaagcatccaatgctcccaagaagagtgagaagaag
aatgttaaacgtacaaccgaggaggagaattcggcagatttcattgatccagtgactgct
tctggtgagaagaaaaatatgtctcctcaaatggcaaaacaatacaatcccactgcagta
gagaagtcgtggtattcatggtgggaggaatcaaggttttttgtggcagattctagcagc
tccaaaccaccatttacaattgtcttgccacctccaaatgtgactggggcccttcacata
ggccatgctcttactgctgctatagaggacactataattcgttggcgacgaatgggtggc
tacaataccttgtgggtgcctggaatggaccatgctgggatagctacacaggtagttgta
gagaagaagctaatgcgagaacgtaagttgacaagacatgatcttggacgggaaaatttt
gtctctgaagtttggaagtggaaaaatttgtatggtggaacgatattacagcagctacga
cgcttgggtgcatctttggattggtctcgtgagtgttttacaatggatgagaagagatct
aaggctgtgatagaggcttttgttaggctttacaaagaaggccttatttacagggatatt
cgcctagtaaattgggattgtaccttgcgaacagcaatatctgatcttgaggttgaatat
gaggatattaaagaaaggacactgcgaaaggttccgggatatgagaagcctgttgagttt
ggtgttttgacttcatttgcttatcctctggaagaagaccttggtgagattgttgtggcc
accactagagtggaaactatgcttggtgatacagccattgctgtgcatcctgatgatgaa
aggtaccgtcatcttcatggaaaatttgctatccatcctttcaatggaagacgtatccct
atcgtatgcgatggtattcttgttgatccgaaatttggaacaggtgctgtgaagattacc
ccagctcatgatcctaatgattttgaggttgggaaacgccataatcttgagtttatcaat
atttttactgatgatgggaaaataaatggcaatggtggtgcggaatttgttgggatgcca
cgtttcaaggctcgggaggcaataactgaagcattgaaaatgaagggtctgtacaaagaa
gctaagatgaatgaaatgcgcctaggcagttgttctaggagcaatgatgttgtagaacct
ctgataaagccccaatggtatgttaattgtgggggtatggcaaaggaatctcttgatgct
gctgtggatgatgaaaacaggaagcttgggttcttcccaaagcaatatattgcagaatgg
aagagatggcttgagaatattcgtgattggtgtatctcaaggcaactgtggtggggtcat
cggatacctgcatggtatgttattctggaggatgatgatctaaaagaagttggcgcatac
aatgacagtaaccactgggtgattgcaagaaatgaggaagaggctcaagaacaggctagt
agtcgttacaatggaaagaaatttcaattatttcaagatccagatgtgcttgacacttgg
ttttcttctggcctcttcccactgtcggtgttgggctggcctgagaatacaggtgatctg
aagacattttatccaacttcagttcttgaaactgggcatgacattctctttttctgggtt
gctcgtatggtgatgctcggtatcaaattgggtggcagtgtaccatttagcaaggtatat
ttacatccaatgattcgtgatgcacatgggcgcaagatgtcaaagtcattgggaaatgtc
attgatccccttgaagttataaatggtgtatctctactagatcttcataaaaggctagaa
gagggtaatttggatccaaatgaactagtggtagccaaagaaggacaggtgaaggacttc
cctaatggtatcactgaatgtggtgcagatgctcttcgctttgctcttgtcacttacaca
gctcagtctgataaaataaacctagatatccaaagggttgtgggttatcgacagtggtgt
aataaattgtggaatgcagtacgatttgctatgagcaaacttggagataattacacgcca
ccctcaaatgtaaaatcaaatgtcttgccatttagttgccagtggatattgtctgcatta
aacaaagccattgcaaagactgtatcatcactggaattgtacgagttttcagatgcagcc
actgcagtttatgcttggtggcagtaccagttgtgtgatgtttttattgaattaattaag
ccttattttgctggaaatgatccgaagtttgcgtctgaaaggagttttgcacaagctaca
ctgtggttatgtcttgataatggtttgcggttgcttcatccatttatgccattcgttacg
gaagaactatggcagcgtcttccttctccaaaggatcatgagagggcagcatcaatcatg
atctctgagtacccatcagttgtagaggactggacaaatgaaagggtggagtatgagatg
gatgtcattgagaattctgtaaaatctctacggtcacttgctaaagaaagccgtgaaaga
cgaccagcttatgtgcattgccgaacaagtccagtcaaagagattattaacaaccatgaa
ttggagattgtaactttagcaaatttatcaaccttgacggtatttagtgaaactgatgct
gctcctgctggatgtgctgtatctgttgtaaatgagaacatttctgtatatcttgatctc
cgaggatcactttctgctgaggcggaacgtgaaaagctcgtgaaaaaaatggaggaggtc
caaaagcaaaaagagaaattgtggaaaaagatgactgcttctggctataaagataaggtt
ccagccaaaattcaagaagacaacgaggccaagctgaagtcccttgaacaggagttttca
gctctggcattagcaagcgagcatattaaagaaacgtaa
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