Entry |
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Name |
(RefSeq) E3 ubiquitin protein ligase RIN2
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KO |
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Organism |
csav Cannabis sativa (hemp)
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Pathway |
csav04141 | Protein processing in endoplasmic reticulum |
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Brite |
KEGG Orthology (KO) [BR:csav00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115705628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:csav04121]
115705628
Enzymes [BR:csav01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
115705628
Ubiquitin system [BR:csav04121]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115705628
Multi subunit type E3
ERAD complex
115705628
LMBR1L-GP78-UBAC2 complex
115705628
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
1:2993014..2999153
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AA seq |
591 aa
MGSSYIAISALCTVLSFVSLHWWTESSLLSLKPDGLISDNNTSAGNTSHVVDLLLGSYTT
VALLANFMLNVFVLLILLLKTIFFVELYPSESRKLVERLVNYVIYKGTFLPLVVQATIYH
AGLWSIWLIVLCFLKMFQALARDRLERLNASPSATPMSYFRVYSVLLLVLFVDVFWIQLC
LVIYRTLNMSVFLLLLFEPLSIAFETLQAILVHGFQLLDIWIHHSAWSSSNCHRFKIFNT
SPAGSLLEWKCVLTRNLGFFLDMATLLMALGHYLHIWWLHGMAFHVVDVALFLNIRALLS
GIVKRVKGFRKLRSALGALHAALPDATPEELRAYDDECAICREPMAKAKKLHCSHLFHLA
CLRSWLDQGLNEIYACPTCRKPLFVFRSEERSQDDANPRNADILSDEQLARQISSGLDTQ
NNAGNSLPTGVIPNQIQNHTEGGPWRNAGLDSSWLHTWPNQGIDGAGPSNAIRSVGLGRV
QMMMRHLASVGETYAQTALEDTAWNLWPMNPSQAAPMVPPIPPAAGGRIPRGTGGLHIRT
ASRSANDNLANMLAMAETVREVLPHIPDDIIFQDLQRTNSATVTVNNLLQM |
NT seq |
1776 nt +upstreamnt +downstreamnt
atgggttctagctatatagccatctcggcgctctgtacagtgctaagttttgttagtctt
cattggtggactgaatcatcattactcagtttgaaaccggatggactaattagtgataat
aatacctccgctgggaacacaagccatgtagttgatttacttttgggatcatatacaaca
gttgcgctgcttgctaattttatgctcaatgtatttgttttacttattctacttttaaag
actatattctttgtggagttgtatccttctgaatctcgaaagttggtagaacgtcttgtt
aactatgtaatatataaggggacatttcttccactagttgttcaagccacaatatatcat
gcagggttgtggtcaatttggttgattgttctttgttttctaaagatgtttcaagcttta
gctagagaccgtcttgaaagactaaatgcatctccatctgccacaccaatgtcatatttc
cgtgtgtattcagtattgttgttggttctctttgttgacgtcttctggatacagctctgt
ttggtaatatatagaactttgaatatgtcagtttttctgctcttattgtttgagccactc
agtatcgcatttgagacacttcaggctattttggtgcatggatttcagttacttgatata
tggatccaccattcagcatggagtagctcaaattgtcatagatttaaaatatttaacaca
tcaccagcaggttcattgctagaatggaaatgtgtacttactcgaaatttgggatttttt
cttgacatggcaacattgttaatggcgcttggtcattatttgcatatatggtggctacat
ggcatggcattccacgtggtcgatgtagcccttttcttaaacatccgtgccttgctaagt
ggaatcgtaaagcgtgtaaaaggatttagaaagttgagaagtgctttaggtgctcttcat
gcagcacttccagatgcaacgcccgaagagctccgagcatatgatgatgaatgtgccata
tgtagggaacctatggctaaggcgaaaaaactacactgcagccacctatttcatcttgca
tgtttgagatcttggttggatcaaggattaaatgagatttatgcatgtccaacttgtcga
aagccactttttgtctttagatctgaagaaagatctcaagatgatgcaaatccacgcaat
gcagacattttgagtgatgaacagcttgctcgtcaaataagttcaggacttgatacacaa
aataatgctggaaatagcctgcctacaggagtaatacccaatcagatacagaatcataca
gaaggcggtccttggaggaatgcaggattagattcaagttggttgcacacttggccaaat
cagggaattgatggagctggtccatctaatgctattagatcagtgggtctggggagagtt
cagatgatgatgaggcatcttgcttctgtcggagaaacttatgcccagactgctcttgaa
gatactgcctggaacctctggcctatgaatccctctcaggctgccccaatggtcccacca
attcctcctgctgcaggtggtagaatccccagaggaactggtggtttgcatataaggact
gcttcgcgatctgcaaatgacaacctagcaaacatgcttgccatggctgagactgttcgg
gaggttttgcctcatatcccagatgacataattttccaggatttgcagcgaacaaattct
gctacggtcactgtgaataaccttctccaaatgtga |