Cannabis sativa (hemp): 115705648
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Entry
115705648 CDS
T08987
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csav03009
]
115705648
Enzymes [BR:
csav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115705648
Ribosome biogenesis [BR:
csav03009
]
Eukaryotic type
Pre-60S particles
Helicases
115705648
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
115705648
NCBI-ProteinID:
XP_030488909
UniProt:
A0AB40ED41
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Position
1:complement(55899578..55903659)
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AA seq
590 aa
AA seq
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MGADPENLNRALTETRFSDLRPELSESVLEALSQTGFEFCTPVQAATIPLLCKFKDVAVD
AATGSGKTLAFVVPLVEIIRRVSTPPKPHQVMGVIISPTRELASQIYKVAQPFIATLSNF
KSILLVGGTDVKADMTMIDEEGANLLIGTPGRLNDIMERMEILDYKSFEVLILDEADRLL
DLGFQTQINAIISRLPKLRRTGLFSATQTEAVEELAKAGMRNPVRVEVRAETKPANGTVS
SEQAASSRTPSSLHLEYLECEADKKSSQLVDLLVKNKSQKIIVYFMTCACVQYWGLVLPR
LAPLKGFNLIPLCGDMKQVAREKALDRFRSLSSGILLCTDVAARGLDIPGVDFVIQYDPP
QDPNVFVHRVGRTARMGREGNSIVFLLPKEEAYVEFLRLRRIPLQEREISEDASDIIPQI
RSAATKDRDVMEKGVRAFVSFVCGYKNHNCSYIFRWKELEIGRLAMGFGLLKLPSMPEVK
RFSLSIEGFTPAEDVKWEDIKFKDKSREKQRKKNLQAKKEKQLHEQPRKPSKSSNAEPSA
MRKKTAKQRRAVQTVEDDDELTRDYRLLKKLKKGTIDESEFAKLSGIEDF
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccgaccccgaaaaccttaaccgggcgctgacagagacccgcttttccgacctc
aggcccgagctctctgagtccgttctcgaagccttatctcaaacagggttcgagttctgc
actccagttcaagccgctacaatccctttgctatgcaaattcaaagacgtagcagtagac
gccgccaccggctcaggaaaaactctagccttcgtagttccactcgtcgagattatccgt
cgcgtttccacccctccaaaacctcaccaggtaatgggagtaattatttctcccacaaga
gaactagcgtctcaaatatataaagttgcgcagccattcattgcgacgctttcgaatttc
aagtccatacttttagttgggggaaccgatgtgaaagcagacatgacaatgatagacgag
gaaggagctaacttgttgattggcactcctggaagactaaacgatattatggaaagaatg
gaaattttggactataagagctttgaggttttaattctagatgaggcagataggctattg
gatttgggattccaaacgcagataaatgcaattatatctcgcttacccaagcttcgtaga
actggcctcttttcagcaactcaaactgaggcggttgaagagcttgccaaggcagggatg
agaaatcctgtgagagttgaagtacgggccgaaacaaagccggcaaatggtacagtatca
tcggaacaagctgcatcttcaagaacaccttccagtcttcaccttgagtacttggagtgt
gaagcagacaaaaaatcatcacagcttgtggatcttcttgttaagaacaagagtcaaaag
attatagtatacttcatgacttgtgcttgtgttcaatattggggccttgttcttccgcgt
cttgctcctctcaagggtttcaatcttattccactatgtggggatatgaagcaggttgca
agggagaaagccttggatcgttttagatcactttcgagtggtattcttctatgcactgat
gttgcagcacgtgggctggacatcccaggtgttgattttgtgattcagtatgatccccct
caagatcccaatgtttttgtacatagagttggacgaacagctcgcatgggcagagaagga
aattcaatcgttttcttattgccaaaggaggaagcttatgtagaattcctacgtctgaga
aggattcctcttcaagaaagagaaatttctgaagatgcttctgatattattcctcagata
cgatctgcagcaacaaaggaccgtgatgtcatggaaaagggagtgagagcatttgtttct
tttgtttgtggatataaaaatcataattgctcatacattttcaggtggaaagaacttgaa
atcgggaggttggccatgggatttggtctcttgaagcttccttcaatgcctgaggtgaag
aggttttcactttccattgagggtttcactcctgctgaagatgtcaaatgggaggacatt
aagttcaaggataaatctcgggagaaacaaagaaagaaaaatttgcaagcaaagaaagaa
aagcagttgcatgagcaacctcgaaagcccagcaaaagttcaaatgctgaacctagtgca
atgaggaagaaaacagctaaacagagacgtgctgtgcagacagttgaagatgacgatgag
ttgacacgagattaccgcctcctgaagaagctgaaaaaggggactattgatgaaagtgag
tttgcaaaattatcagggattgaagacttttga
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