Cannabis sativa (hemp): 115705699
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Entry
115705699 CDS
T08987
Name
(RefSeq) ribonuclease TUDOR 1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
csav
Cannabis sativa (hemp)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Motif
Other DBs
NCBI-GeneID:
115705699
NCBI-ProteinID:
XP_030488962
LinkDB
All DBs
Position
1:27231784..27238242
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AA seq
990 aa
AA seq
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MASSVAGATGWYKGKVKAVPSGDSVVIVAMTNKPGPPPEKTITLASLIAPRLARRGGVDE
PFAWDSREFLRKLCIGKEVSFHVDYTVPSIGREFGSVFIGRDNVAKLVVAAGWAKVREQG
QQKGEASPDIAELLNLEEQAKQEGLGRWSKVPGAAEASVRDLPPSAIGDPSNLDAMGLLA
ANKGRPMQGIVEQVRDGSTVRVYLLPEFQFVQVFVAGIQSPSMGRRPAPEPVIEAEVPDE
ANGNASTEPRGPLTSAQRVAASTPSPNEGADPFAAEAKYFTEIRTLNREVRIVLEGVDKF
SNLIGSVYYPDGESAKDLALELVENGLGKYVEWSANMMEEDAKRKLKTAELQAKKTRLRI
WTNYIPPATNSKAIHNQNFTGKVVEIVSGDCVIVADDAVEFGSPSAERRVNLSSIRCPRI
GNPRRDEKPAPYAREAKEFLRTRILGKQVNVQMEYSRKVGMTDAPTAAAGSTDSRVMDFG
SIFLVSPVKAEGDDIPVQATTASQPAGVNVAELVVGRGFGTVIRHRDFEERSNHYDALLA
AETRAIAGKKGIHSAKDPPVMHVTDLIAAPSKKSKDFLPSLHRAGRIPAVVEYVFSGHRF
KVLLPKQTCSIALSLSGVRCPARNEPYSEEAIALMRRKIMQRDVEILVENVDKTGTFIGS
LWESKHNVAVALLEAGLAKLQNSFGNDRIIEFHLLEKAEQVAKKQKLKIWENYVEGEEVS
NGAAAVAAESKQKEVLKVVVTEVLGGGMLYVQTVGDQKLAPIQQQLAALNIQEAPVIGAF
NPKKGDMVLAQFSADGSWNRAMIVNGPRGAVESLTDKFEVFYIDYGNQEVVTYKQLRPVD
ASVSAAPGLAQLCNLAYIKVPGLEDDFGEEAAEYLSELTLSSSKEFRAKIEERDASGGKV
KGQGTGPIISVTLVAVDAEISVNAAMLQDGLARLEKRRRWGSKDKQLAFENLEKFQEEAR
TGRRGMWRYGDIESDDEDAPPLRKAAGGRR
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctccgtagctggggccacaggatggtacaaaggaaaggtcaaagctgtccct
tctggggattccgtggtgattgtggccatgaccaacaagcccggaccaccaccggaaaag
accattactttagcttctctgattgctcccagactggctcggagaggtggtgttgatgag
ccgttcgcttgggacagcagagagtttctgaggaagctctgtataggaaaggaagtctct
tttcacgtcgactacacagtaccgtctattgggcgggaatttggctctgtttttataggc
agagacaatgtcgcaaagctggttgttgctgcaggctgggcaaaggtcagggagcagggt
cagcagaaaggggaagctagtcctgacattgcagagctcttgaacctagaagagcaagct
aagcaagaaggacttggtcgctggagcaaggttcctggtgctgctgaggcatccgtgagg
gatctacctccctctgctataggtgatcctagcaacctagatgctatgggtttgttggca
gcaaataagggcaggcccatgcaaggcattgttgagcaggttcgtgatggtagtacggtt
cgcgtttacttgcttccagagtttcagtttgttcaggtgttcgttgctggaatccagtct
ccatcaatgggaagacgacctgcacctgagcctgttattgaagcagaagtaccagatgaa
gcaaatggaaatgcttctactgaacctcgagggccactaacatctgcacaaagagttgca
gcttcaacaccttcaccaaacgaaggtgctgatccatttgctgcggaagccaagtatttt
acagagatccgtacattgaatcgagaggttcgtattgtcttggaaggtgtcgacaaattc
agtaatttgattgggtcagtgtattatcctgatggagaatcagcaaaagacctggctctg
gagctcgtggaaaatggtcttggtaagtatgttgaatggagcgcaaatatgatggaagaa
gatgcgaagagaaagctaaaaactgcagaacttcaggccaaaaaaaccagattgaggatt
tggacaaattacattcctcctgctacaaactcaaaagcaattcacaaccagaatttcaca
ggaaaggtggttgagattgttagtggggactgcgttattgttgcagatgacgctgttgaa
tttggaagtccttcagctgagcgacgagtgaatttgtctagtattaggtgtcctagaata
ggcaaccctcggagagatgaaaaacctgctccctatgctcgtgaagcaaaagaattcctg
agaactcggattctgggaaaacaagtaaatgtacaaatggagtactctagaaaggttggc
atgactgatgcgcctacagctgcagctggatctacagattccagagtaatggattttgga
tcgatctttctagtttctcctgttaaggctgagggagatgatatcccagtacaagccact
actgccagccagccagctggggtgaatgttgctgagcttgtggttgggcggggctttgga
actgttattaggcatcgagattttgaggaaaggtcaaatcattatgatgcccttctagct
gcagaaacacgagcaattgctgggaagaaaggaattcactctgccaaggatcctccagtc
atgcacgtaaccgatcttattgcggcaccatcaaagaaatcgaaggactttctaccatcc
ctacacagagctgggaggattcctgctgtggtggagtatgtatttagtggtcaccgtttc
aaagtattactcccaaagcaaacatgcagcattgccttgtcactttctggtgttcgatgc
cctgctcgtaatgaaccatattcggaagaagcaattgctttaatgaggcggaaaataatg
cagagagatgttgagattctagtggaaaatgtcgataagactggaactttcattggatct
ttgtgggagtctaaacacaatgtggcagttgcacttcttgaagctggactggccaaactt
caaaattcctttggcaatgacaggattattgaattccaccttcttgaaaaagctgagcaa
gttgccaaaaaacagaagctgaaaatatgggagaattatgttgaaggggaggaagtctcc
aacggtgcagcagcagtagcagctgaaagtaaacaaaaggaagtcctaaaggtggtggtt
actgaagttttgggtggaggcatgctgtatgttcagacagttggggatcagaagcttgca
cccattcaacaacagttggcggccttgaatattcaagaagctcctgtgattggagctttt
aatcctaaaaagggggacatggttcttgcacagtttagtgcagatggttcttggaaccga
gctatgattgtcaatggaccacgtggagctgttgaatctcttacggacaagttcgaagtg
ttctacattgactatggtaatcaagaggttgttacctacaagcaattgcggcctgttgat
gcttcagtgtctgctgcacctggccttgctcagctctgtaaccttgcctacatcaaagtt
ccaggcttggaggatgattttggtgaagaagcagctgagtatttaagtgagctgactcta
agtagctctaaagagtttagagccaagattgaggaaagggatgcttcagggggaaaagtg
aaaggtcagggaaccggaccaatcattagtgttactctcgtcgctgttgatgctgagatc
agcgtaaacgctgccatgcttcaagatggacttgctagactagagaaaaggaggagatgg
ggctcaaaggacaagcaattggcctttgagaacctggagaaattccaggaagaagctcga
actggtaggcgcggaatgtggcgctacggggacattgagtctgacgatgaggacgctccc
cctcttagaaaagctgctggcggccggcggtaa
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