Cannabis sativa (hemp): 115705708
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Entry
115705708 CDS
T08987
Name
(RefSeq) chloride channel protein CLC-c-like
KO
K05016
chloride channel 7
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csav01009
]
115705708
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csav04131
]
115705708
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csav04040
]
115705708
Protein phosphatases and associated proteins [BR:
csav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115705708
Membrane trafficking [BR:
csav04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
115705708
Ion channels [BR:
csav04040
]
Chloride channels
Chloride channel (CLC)
115705708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
115705708
NCBI-ProteinID:
XP_030488981
LinkDB
All DBs
Position
1:27108558..27112722
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AA seq
806 aa
AA seq
DB search
MDSGLQGKHNMDPHGDGIGNGNGDDDDNCEVVETRELWDANGKEIRQYWSEISVSVDADD
KSFSTTQPLLLKRRNTTSQIAIVGSNLYSIESLDYEIAENELFKQDWRSKKKVHIFQYVL
LKWAFALLIGLGTGLVGFLNNIAVENIADFKLLLTTDLMSKHRYYTAFAAFAGCNIGLAV
AAGALCAYIAPAAAGSGIPEVKAYLNGIDAHSILAPSTLLVKIFGSILGVSAGFVVGKEG
PMVHTGACIASLLGQGGSRKYHLTWSWLRYFKNDRDRRDLITCGAAAGVAAAFRAPVGGV
LFALEEAASWWRGALLWRAFFTTAVVAIVMRAFIQFCSTGKCGLFGLGGLIMYDVSSAEA
IFSASDILAVIFLGVIGGLLGSLYNYLVDKVVRTYSIINEKGPVAKILLVMTIAILTSCC
SFFLPWSAKCIPCPEGLTVSCPTVYSGNYKAFQCPPGHYNDLASLFLNTNDDAIRNLVST
GTIKEFQISSLFIFFAAVYFLGIVTYGIAIPSGLFIPVILAGACYGRLVGRLFETASHLD
TGLFALLGAASFLGGTMRMTVSLCIILLELTNDLLLLPLVMLVLLISKTVGDCFNKGVYD
QILKIKGLPYMEAHSEPFMRHLVAGDVVSCPLITFSGIEKVGTILHALRITGHNGFPVID
EPPFSDSPELCGLVLRSHLLVLLKGKNFTKEKVMCGREILGRFSASDFAKAGSGKGIKLE
DIDIEEEEMEMYVDLHPITNTSPYTVVDSMSLAKAAILFRQLGLRHMCVVPRSQKTDPIV
GILTRHDFMEEHILGLYPHMDPHKQK
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggattctgggttgcaggggaagcataatatggatccgcatggtgatggtattggtaat
ggtaatggtgatgatgatgataattgtgaggtggtggagactcgagaactgtgggatgcg
aatgggaaggagatccgacaatattggtcggagatatctgtgtctgtcgatgccgatgat
aagagcttctctactactcagcctcttttgctgaagaggagaaacactacttcccaaatt
gccatagttggttccaatctctattcaatcgagagtcttgattatgagattgctgaaaat
gaactctttaagcaggattggagatcaaagaagaaggtgcacatatttcagtatgtacta
ctcaagtgggcatttgctcttctcattggactcggaacaggactagttggcttcttaaat
aatattgcagtcgagaatattgcagattttaagctccttttgactactgatcttatgtct
aagcatagatactacacggcttttgctgcatttgctggttgcaacattggtttggcagtt
gcagcaggtgctttatgtgcttatattgctccagctgcagcaggttctggtattccagag
gttaaagcctatctcaatggtattgatgctcattcaatactcgctccaagcaccctcctt
gtcaagatttttggatccattttgggagtctctgcaggctttgtggtgggtaaagaaggg
cctatggtacacacaggggcttgcatagcttctctgcttggacaaggaggttcacgcaag
tatcatttgacatggtcgtggctgagatacttcaagaatgatagggatcgacgagacttg
atcacttgtggtgctgctgctggagtagctgcagcatttcgtgcccccgttggtggtgtt
ctgtttgcccttgaggaggctgcttcttggtggcgaggagcacttctttggagggcattt
ttcacaacagcagtagttgctatagtaatgagagcttttatacaattttgctctacggga
aaatgtggtctattcgggctaggaggtctgatcatgtacgatgtaagctcagctgaagca
atatttagtgcctctgatattttagctgtgatattccttggtgttattggaggcttactt
ggaagtctctacaactaccttgtggacaaggtagttcgaacttatagcattattaatgaa
aaaggtcctgttgcaaaaatcttactggttatgaccatagccattttgacttcatgttgc
tctttcttcttgccttggtctgccaagtgcatcccttgccctgaaggcctcacagttagc
tgccctactgtttattctggtaactataaggccttccagtgtccaccaggccactacaat
gatcttgcctcccttttcttaaacaccaacgatgatgctattcgcaacctcgtcagtaca
ggcacaataaaggagttccagatatcctcactcttcatcttctttgcagctgtttacttc
cttggaattgtaacttatggaatagctattccttctggactttttatcccagtcatactt
gctggagcttgttatggcagacttgttggaagactctttgaaacagcctctcacttggac
actggtctctttgccttacttggtgcagcctctttcctcggcggcacaatgagaatgacg
gtttccttgtgtatcatactgcttgaacttacaaatgatctgttgttgctccctcttgtg
atgcttgttcttctaatatctaaaactgtgggtgattgcttcaacaagggagtgtatgac
caaatcttgaaaataaagggattgccttatatggaggctcattctgagcctttcatgagg
catttggttgcaggtgatgttgtttcctgtccgttgataaccttttctggcatcgaaaag
gtgggaactatactacatgcgctaaggataacagggcataatgggtttccggtgattgat
gaaccgcctttttcagactctccagagttgtgtggtctagtgttgaggtctcatttgctt
gttttgctaaaggggaaaaactttacaaaggagaaagttatgtgtggtagggagatacta
ggaaggttctctgcgtctgattttgcaaaagcaggatcagggaaaggaatcaaattggag
gatattgatattgaagaggaggagatggagatgtacgtggatcttcatcctattacaaac
acatctccatacacagtggttgattccatgtcacttgccaaagctgccattctctttcgc
caacttggtctcaggcacatgtgcgtggtgccaaggagccaaaagacagatccaattgtg
ggaattttgacgaggcacgacttcatggaggagcacattttgggactataccctcatatg
gatcctcacaagcaaaaatga
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