Cannabis sativa (hemp): 115706008
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Entry
115706008 CDS
T08987
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00040
Pentose and glucuronate interconversions
csav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115706008
Enzymes [BR:
csav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115706008
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
VWC2L_C
Motif
Other DBs
NCBI-GeneID:
115706008
NCBI-ProteinID:
XP_030489362
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Position
1:31872877..31877926
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AA seq
508 aa
AA seq
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MLSTTCILLICLSSFLSPIVRATLTLNLTLPHQHPDPEAVVQEVQRRVNASVSRRQMLSV
HEKDQCSTGNPIDDCWRCNSNWQVNRQRLADCGIGFGQDAMGGKGGQIYVVTDSSDRDVA
RPVPGTLRYAVIQTEPLWIVFSADMTIKLKHELIINSFKTIDGRGANVHIVGNGCLTLQS
VSNVIIHNIHIHHCKPSGHADIASSPTHVGWRGVSDGDGISIYSARKIWIDHCTLSYCTD
GLIDAIMGSTGITITNNHFSHHDEVMLLGHNDNYLPDSGMQVTIAFNHFGPALVQRMPRC
RRGYIHVVNNDFTQWEMYAIGGSANPTINSQGNRYIAPANQNAKEVTKRVDTNEGDWTGW
NWRTEGDMMVNGAFFVPSGGGLSTQYAKASSVEPKSAALIDQLTSTAGVFGDPRDKSVSL
PGFSGGGSISGATSNTGHGTSSTSNGDDDYFGMIFGSGSSSAAGPMTPTPSPSFSIFLSL
LIILVISFTTNCGAQLSLPLLLLSSSLL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgttatctaccacttgcattctcttaatatgcctctcgagctttctctctcccattgtc
agagccacattaaccctcaatctcaccctccctcaccagcatcctgatcctgaagctgtg
gttcaagaagttcaaaggagagttaatgcctcagtatcaagaagacagatgctttccgta
catgaaaaggatcagtgctcgaccggaaatcccatcgacgattgctggcgctgcaactca
aattggcaagtgaatcgccagagactcgctgattgtggcattgggtttggccaggacgca
atgggaggtaaaggcggccagatctacgtcgtaacggactcctccgaccgcgacgtggcc
cgtccagtccccggaacgctccgctacgccgtgatccaaacagagccactctggatcgtc
ttctcagccgatatgaccatcaagctcaagcacgagcttataatcaacagcttcaagacc
atcgacggccgtggcgccaatgtccacatcgtcggaaacggttgcctaaccctccagtcg
gtctctaatgtcatcatccacaacatccatatccaccactgcaaaccctcgggacacgca
gacattgcctcgagtcccacccacgtcggatggagaggtgtatcggacggcgatggtatc
tccatctacagcgcacgcaaaatctggatcgaccactgcacgctgtcttactgtacggac
ggtttgatcgacgcaataatgggttcgacggggattacgatcacgaacaaccatttctca
caccatgatgaggttatgcttttgggccacaacgataactacttgccagattcaggtatg
caggttacgattgccttcaaccattttgggccggcgctggtgcagcgtatgcccaggtgt
agacgcgggtacatacacgtggtcaacaacgatttcactcagtgggagatgtatgccatc
ggcggtagtgctaaccccaccattaacagccagggtaatcgatacattgccccagcaaac
caaaacgccaaagaggtgacgaagcgcgtggatacaaacgagggtgactggactgggtgg
aactggaggacagaaggggacatgatggtaaatggagcgttcttcgtgccctccggggga
gggcttagcacacagtacgccaaggcctctagtgttgagcccaaatcagccgccctcatc
gaccagctcacttccaccgctggcgtcttcggtgaccccagggacaagagcgtatcacta
cctggattcagcggcggtgggagcataagtggggccacaagcaacaccgggcatgggacc
tcctccacctccaatggcgacgacgactacttcggaatgatatttgggagtggttcgtca
tcagcagccggccccatgaccccgaccccttccccttctttctctatctttttgtctctt
ttaattattttagtcatctctttcaccaccaactgtggtgctcaattatcattaccatta
ttattattatcatcatcactgttatag
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