Cannabis sativa (hemp): 115706160
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Entry
115706160 CDS
T08987
Name
(RefSeq) serrate RNA effector molecule
KO
K27103
serrate RNA effector molecule
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115706160
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
115706160
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
115706160
NCBI-ProteinID:
XP_030489561
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All DBs
Position
1:32870534..32877213
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AA seq
699 aa
AA seq
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MPLDSLDKSPSAAAADDDLPPPTQPPPSRRRDRRDDRDFDRPPYRRDYGDRSSPPPPPLR
DRDRDRDYKRRRSPSSPPYRERRYSPQSFKRSRRVSPRGGYGPDDRFGYDNNGGYERGVG
GRSGYADEKSHGRFNRSMGGYHHGPTDAGFNRGGYADSSNRGNTQREGLMSYKQFIQELE
DDVLPSEAERRYQEYRSEYISTQKRTFFTAHKGEEWLKNKYHPTNLVGVIERRNEHARQV
AKDLLLDLQSGTLDLNPGVTASSSSKLGQASEPNSDDEAADAGGKRKQHGRGRADDIDFS
AAPKAHAISSEPRRIDADINQALALLRKLDDEKGIKDHILKNVDYDSEKPHGGSGQIVII
RGLTSVKGLEGTELLDTLITYLWRVHGLDYYGMVESNEPKGFRHVRPDGKNHGETNESGA
EWEKKLDSFWEERLQGQDFLEVMSAKEKIEAAANEVLDPYVRKIRDEKYGWKYGCGAKSC
TKLFHAAEFVHKHLKLKHPEVVMELTSKMRDDLYFQNYMNDPDAPGGKPVMQQTFQKDRP
QKRRLGIESRLKDDRHLRTVDGVNDGERFNNSESSPSRQSKAGGVEMGNQDESMYDAYAG
QGMGAPFASDMPSVLMPVPGAGPLGPFVPAPPEVAMQMLRDQPSVYDASGRQMRSGAQIG
GPTPILTVPPFRQDPRQMRSYQDLDAPDDEVTVIDYRSL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcctctagattccctcgataaatctccttccgccgccgccgcggacgatgacctgcct
ccaccaacgcaacctcctccgtcccgtcggagggataggagagatgatagggattttgat
cgtcctccttaccgccgcgattatggcgaccggagctcgcctccgcctccgccgttgagg
gaccgggacagggatagggactataagcggcgccggagccctagctctcctccgtaccgt
gagcggcgatattctccccagtcttttaagcggtccaggcgcgttagtcctcgcgggggt
tatggacctgatgataggtttggatatgataacaacggtggatatgagcgtggggtggga
ggaagatcaggttatgctgatgagaagtctcatggtcgatttaatcgttcaatgggtggc
tatcatcatgggccgactgatgctggatttaatcgagggggttatgctgattcatcaaac
agagggaatacacaaagagaggggttgatgtcgtataaacagttcattcaggaacttgaa
gatgatgtattaccatctgaagctgagcgcagatatcaggaatatagatcggagtacatt
tccactcagaagcggactttctttactgctcataagggcgaggagtggttgaaaaacaag
tatcatcctactaatttagttggagtcatcgaaaggagaaatgaacatgcacggcaggtg
gcaaaggatcttttgcttgatttgcagagtggaacattggacttgaatcctggcgtaacg
gcctcatcatcaagcaaattaggacaagcaagcgaaccaaattctgacgatgaagcagca
gacgctggtgggaaacgaaagcaacatggtaggggtagagctgatgacattgatttttca
gctgctcccaaggcccacgcaatcagttctgaacctagacgaatagatgcagatattaat
caagcccttgctctcctacgtaagcttgatgatgaaaaaggcatcaaagaccatatttta
aaaaatgttgactatgatagtgagaaacctcacggtggttcaggtcaaatagttattata
cgtggtttaacatccgttaaaggactagaaggaactgagctactcgacacactaattaca
tatctctggcgtgttcatgggttagattattatggcatggttgaaagtaatgaaccaaaa
ggttttaggcatgtgagacctgatggcaagaatcatggagaaacaaatgaatccggggct
gagtgggaaaagaaacttgactcattttgggaagaaaggttacaaggtcaggatttcttg
gaagtgatgtctgccaaggagaagatagaagcggctgcaaatgaagttttagatccatat
gtaagaaaaataagggatgaaaagtatggatggaagtatggctgtggagctaagagctgt
acaaaacttttccatgctgctgagtttgttcataaacatctgaagctgaaacatccagag
gtcgtgatggagcttacttccaaaatgcgtgatgatctatattttcagaactacatgaat
gatccggatgctcctggtggaaaacctgtcatgcagcaaacttttcagaaggacagacct
cagaagcgtaggcttggtatcgaaagccgattaaaagatgatcgtcacctgagaacggtt
gatggtgttaatgatggagagcggtttaataattctgagagttctccaagcagacagtcg
aaagctggtggtgtagaaatggggaatcaagacgaatctatgtatgatgcatatgctgga
caagggatgggtgctccttttgcctcagatatgccttctgtattgatgcctgtacctggt
gctgggcctttgggaccctttgttcctgccccacctgaagttgcaatgcagatgctaagg
gaccagccttctgtgtatgatgccagtggtagacaaatgagatctggtgctcaaattgga
ggaccaacaccgattcttactgttcctcctttcaggcaggatcctcgacaaatgcgaagt
tatcaagatcttgatgcccctgatgatgaggtcactgtaatcgactaccgaagcttgtaa
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