Cannabis sativa (hemp): 115706223
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Entry
115706223 CDS
T08987
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115706223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csav03009
]
115706223
Ribosome biogenesis [BR:
csav03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
115706223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_16
AAA_14
AAA_22
TIP49
nSTAND3
Rad17
RNA_helicase
AAA_33
AAA_17
AAA_28
AAA_2
AAA_18
IstB_IS21
NPHP3_N
Mg_chelatase
Viral_helicase1
Bac_DnaA
ATPase_2
NACHT
AAA_3
Nucleolin_bd
Parvo_NS1
Cytidylate_kin2
ABC_tran
TsaE
NB-ARC
AAA_25
AAA_11
Sigma54_activat
Sigma54_activ_2
Zeta_toxin
ATPase
AAA_7
CPT
nSTAND6
ATP-synt_ab
Hydin_ADK
Vps4_C
Motif
Other DBs
NCBI-GeneID:
115706223
NCBI-ProteinID:
XP_030489661
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Position
1:19255251..19260470
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AA seq
707 aa
AA seq
DB search
MRQKSRIRAREEKVLGRRLQSFKNLNSSTVDEIADDLQFSYPEYKRQKRPIFMKLLHDVL
EPNMRHEERSLSSRKKYKRDVDDGNIWENNQNCPSVSDVDSGVVSMPTSTSNLQKKEVLE
LDLPVPVSEVKVNLGFEDLGGIKGVLKQLEKKVLVPLYQHQLLQFLGVRPISGLLLHGPP
GCGKTKLAHAIANQTGLPFYNISATEFVSGVSGESEENIRELFQKAHKTAPSIIFIDEID
AVASKRENLQKEMERRIVTQLMTCMDAHSESKVSSDDKQSYVLVIGATNRPNAIDPALRR
PGRFEYEIELGVPDENARAEILSVLTRTMRLEDSFDLLKIARATPGFVAADLKALASEAG
HLVAEKLLYDRKSSLCGNSMEEDQNTQWLKEPVMPEVMEKISITMADFEEAIKIVQPSTR
REGFSTIPNVKWEDVGGLDHIRKELDRYIVSRIKYHEKYKRFGVNLDTGILLYGPPGCGK
TLIAQAVAKEAGANFIHIKGPELLNKYVGESESAVRMLFSRARMCSPCILFFDEVDALTK
ERGKEGSWVTERLLNQLLTELDGVDKRQNVFVIGATNRPDVMDKASLRPGRFGKHLYVSL
PTPDERGLILKALTRDKPLDETVDLNAIGRMKGCDNFSGADLHALVNEAALAALEDFDED
SIKTTHFDQALTKISSSVAPQQRQCTQLLSKPLQSNTRGKTKSFLLD
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgagacaaaagtcaagaataagagcgagagaggagaaagttcttggccgacgtcttcag
tcttttaagaaccttaattcatccacagtcgatgaaatcgccgatgatcttcagttcagt
taccctgaatacaaacgacaaaagagacccatttttatgaaactactccacgatgtccta
gaacccaacatgagacacgaggagaggagcctttcctctcggaagaagtataagagggat
gttgacgatggaaatatttgggagaacaatcagaattgtccgagtgtgtctgatgttgac
agtggggttgtgtcgatgccgacatcgacatccaacttacaaaagaaggaagttttggaa
ttagacctccctgttcctgtgagtgaggtgaaagtgaatttagggtttgaggatttggga
gggattaaaggggttttgaagcagcttgagaagaaggtacttgtgcctctctatcaacat
cagctattgcaattccttggagttcggccaatttctggccttttgttgcatggaccacca
ggttgtggtaagaccaaattagctcatgccattgccaaccaaactggattgcccttctac
aatatttctgccactgagtttgtctctggagtttcaggtgaatctgaagaaaatatacga
gagctttttcaaaaagcacataagactgccccttcaataatttttattgatgagattgat
gctgttgcatcaaaaagagaaaacttacagaaggagatggagcgacgcattgtgactcag
ttaatgacttgtatggatgcacattcagaatcgaaagtttcttctgacgataaacagagt
tatgttctcgtaattggagccactaatagacctaatgctattgaccctgcactaaggagg
ccagggcgttttgaatatgagattgagttaggggtaccagatgaaaatgcgagggcagag
attctttctgtcctcacaagaaccatgagacttgaagactcttttgatcttcttaaaata
gccagggctaccccaggatttgttgcagcagatttgaaggccctggcttccgaagcaggt
caccttgtagcagagaaacttttatatgatagaaagtccagtttatgtgggaattctatg
gaggaggatcaaaatacacaatggttgaaagaaccagtcatgcctgaagtaatggaaaag
ataagcatcaccatggctgattttgaggaagcaattaaaattgtccaaccctctactaga
agagaaggtttttctaccattcctaatgtaaaatgggaagatgtaggcgggctagatcat
ataaggaaggaacttgatcgatacatagttagtcgtattaaatatcacgagaaatataag
agatttggagtgaatttagatacaggaattttgctttacgggcctccaggatgtggtaag
acgttgatagcacaagctgttgctaaggaagccggagctaattttattcacatcaagggc
cctgaacttctgaataaatatgttggagaaagtgaatcagcagttcggatgttatttagt
cgtgcaaggatgtgttcaccatgcatacttttctttgatgaggtagatgccttgacaaaa
gagcgtggaaaagaggggtcatgggtgactgagcggctacttaaccagttgcttaccgag
ttagatggtgtagacaagcgtcagaatgtctttgtaattggtgccacgaatagaccggac
gtgatggacaaagcttctttgcgacctggtaggtttggcaagcatctgtacgtgtctttg
ccaactcctgatgaacgtggtttgatcttgaaagccctgacaagggataagccgttagat
gaaactgttgatttgaatgctattggacggatgaagggctgcgataatttcagcggggct
gacctacatgcattggttaacgaagctgcattggctgctcttgaagattttgatgaagat
agtatcaaaacaacacattttgatcaagcactcactaaaatctcttcgtctgttgcgccc
cagcaaagacagtgcacccagttattatcaaaaccacttcaaagcaacacacgaggaaaa
actaaaagcttcctgttggattag
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