Cannabis sativa (hemp): 115706248
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Entry
115706248 CDS
T08987
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 4
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115706248
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csav01009
]
115706248
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csav03021
]
115706248
03019 Messenger RNA biogenesis [BR:
csav03019
]
115706248
03041 Spliceosome [BR:
csav03041
]
115706248
Enzymes [BR:
csav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
115706248
Protein phosphatases and associated proteins [BR:
csav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
115706248
Transcription machinery [BR:
csav03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
115706248
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
115706248
Spliceosome [BR:
csav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115706248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
115706248
NCBI-ProteinID:
XP_030489696
LinkDB
All DBs
Position
1:complement(7490055..7493078)
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AA seq
312 aa
AA seq
DB search
MSSQVQSGMDPAVLDDIIKRLTEVRSARPGKQVQLSESEIKQLSVASREIFLRQPNLLEL
EAPIKICGDIHGQYSDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAFKIKYP
ENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDDKILCMHGG
LSPDLTHLDQIRSLTRPTAIPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGSDKVGEF
LQQHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMIVDENLMCSFQI
LKPAEKKAKFLM
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgcaagtgcagtcggggatggaccctgccgtcctcgacgatataatcaaacgg
ctaacggaggttcgatcagctagacccggtaagcaggttcaactttccgagtccgaaatc
aagcaactttctgttgcatctagagaaattttcctccgccagcctaatttgcttgagctt
gaagcccctatcaaaatttgcggtgacatccatggtcagtacagtgatctgctaaggctt
tttgagtatggcggttttcctccaaatgccaattatctatttctaggtgactatgttgat
cgtggcaagcagagtttggaaacaatatgccttttgcttgcttttaagattaagtatcca
gagaacttttttcttcttagaggaaaccatgagtgtgcttctattaatcggatatatgga
ttttatgatgagtgtaagcgtcgatttaatgtgagactctggaaggcgttcactgactgt
ttcaactgtcttccagtggcagctcttattgacgacaagatattatgcatgcatgggggt
ctgtcccctgatttgacacatttagatcagataaggagcttaactcgaccaactgctatt
cctgacactggcttgctttgtgacttgctttggtcggatcccggtagagatgttaaggga
tggggaatgaatgacagaggagtctcatacacctttggttcagataaggtgggagaattc
ttacagcagcatgatttggaccttgtctgtcgtgctcatcaggttgtggaggatgggtat
gaattttttgctgacaggcaacttgtaacaatattttcagccccaaactactgtggtgaa
tttgacaatgctggtgcaatgatgattgttgatgaaaacttaatgtgctctttccagatt
cttaagcctgcagagaagaaagctaagttcttgatgtga
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