Cannabis sativa (hemp): 115706299
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Entry
115706299 CDS
T08987
Name
(RefSeq) peroxisome biogenesis factor 10
KO
K13346
peroxin-10
Organism
csav
Cannabis sativa (hemp)
Pathway
csav04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115706299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csav04121
]
115706299
Ubiquitin system [BR:
csav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
115706299
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Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
RING_XB3-XBAT31
zf-rbx1
zf-C3HC4_4
zf-RING_5
Prok-RING_4
U-box
zf-RING_10
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
115706299
NCBI-ProteinID:
XP_030489762
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Position
X:5171410..5174341
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AA seq
394 aa
AA seq
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MGLGRSEGMDSGEASSSGGEMGPNSSEPLIPRRFPLAAQPEIMRAAEKDEQYASFVYDAC
RDAFRHLFGTRVAVAYQNETKLLGQMLYYVLTTGSGQQTLGEEYCDITQVAGHYGLPPTP
ARRALFIVYQNAIPYIAERISSRVASRGIVLADSLSEDPYGSNSDRVNSSTMMIDSSSTS
TSEQSVSALSRLKQKFNRLWLSGIQRWPVVLPLAREFMLLLVRANLMFFYFEGLYYHISK
RAAGISYVFIGKPLNQRPRYQILGVFLLIQLCIIAAEGLRRSNLSSITSSVRQATLGAHH
ASTGGGLPILNEEGNLVTTDTDKGSWVNDSSSTSESISKCTLCLSNRQNPTATPCGHVFC
WSCIMEWCNEKPECPLCRTPITHSSLVCLYHSDF
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgggaagaagtgagggaatggattccggcgaggctagctcgagcggaggtgaa
atgggtcctaacagctccgaaccgctgattccacggagatttccgctggctgctcagccg
gaaatcatgagagccgccgagaaagatgaacagtacgcgtccttcgtctacgatgcctgc
cgcgatgcttttcgacaccttttcggtacaagagttgccgtagcttatcagaatgagact
aagctactggggcagatgctttattatgtgttgactactggttcagggcagcaaactctg
ggagaagagtactgtgacatcacccaggttgcaggacattacgggcttccaccaaccccg
gccaggcgtgcacttttcattgtttaccagaatgctattccttacattgccgagcgaatt
agctcgagagttgcttctcgtggcattgttcttgcagattcactatctgaagatccctat
ggaagcaatagcgatcgtgttaattcatctacaatgatgattgatagttcatccacttct
acttcagagcaatctgtttctgctttatcaaggttgaaacagaaattcaatcggttatgg
ctctctggaattcaaagatggcctgtggtgcttcctcttgctcgggaattcatgctacta
cttgttcgcgcaaacctcatgttcttttactttgaaggcctctattatcatatctctaaa
cgtgccgctggaattagttatgtctttattggaaaacctttaaatcaaaggcctagatac
caaattttgggagtgtttttgctaattcagctatgtattatagctgctgaaggtctacgt
cgtagcaatttgtcctcgattacaagttcagtccgtcaggcaacactcggagcccatcat
gcctcaacaggtggaggtttgcctattctaaacgaggaaggtaatttggtaacaaccgac
actgataaaggaagttgggtaaacgattcgtcgtcaacttcagagtcgattagcaaatgc
acgctttgcctaagtaatcgccagaacccgacagccacaccttgcggccatgtattctgc
tggagttgcattatggaatggtgcaatgaaaagcctgaatgccctctctgtcgaaccccc
ataacccattcgagcctcgtttgcttgtaccactcagacttctag
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