KEGG   Cannabis sativa (hemp): 115706381
Entry
115706381         CDS       T08987                                 
Name
(RefSeq) protein SPA1-RELATED 3 isoform X1
  KO
K26557  protein SPA1-related 3/4
Organism
csav  Cannabis sativa (hemp)
Pathway
csav04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:csav00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    115706381
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csav04121]
    115706381
Ubiquitin system [BR:csav04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    115706381
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 EIF3I Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd Pkinase WD40_MABP1-WDR62_1st WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_SCAP PK_Tyr_Ser-Thr WDR54 NBCH_WD40
Other DBs
NCBI-GeneID: 115706381
NCBI-ProteinID: XP_030489874
LinkDB
Position
1:35952870..35958668
AA seq 912 aa
MICRFEPSYRWIAMEGSTESTRMKSSSSRELNASRVSNLDLRLPQGGGTGLSGVVLNDTS
HREGDDNRVSFAHNDYVQNQGGLSGVCEDEVAVDPYVRAIEWGDISLRQWLDKPERSVDV
FECLHIFRQIVGIVNVAHSQGIVVNNVRPSCFVMSSFNLVSFIESASCSDSGSDNLEDGS
NSPTPEPKTSSTSLPDDDLCTQKRNPGSEDLQPMKASANAFSETSCMQSSSTYAPRESLV
VETEENRNKDRRSAEVEEKKQPFPMKHVLLMETNWYTSPEEATGASSSCASDIYRLGVLL
FELFCPSSSREEKSRTMSSLRHRVLPAQLLLKWPKEASFCLWLLHPEPTSRPKMGELLQS
EFLNEPRDDLEEREAAIELREQIEEQELLLEFLLLIQQRKLEAADKLQNTLSFLCSDIEE
VTKQQSILKKKGGSCPDLVKEDNSTSSLPSMNIVINDDSTSLGSRKRFRPGLRNLQLEEC
DDNIDGEQKSDSEDQDNILLKNSRLMKNFKKLESAYFSTRCRPAKLAGKHVIRQTPISSD
GKGSAIVSERSFVNNLTSKDRSYERRQSGWINPFLEGLCKYLSFSKLKVKADLKQGDLLN
SSNLVCSLSFDRDGELFATAGVNKKIKVFECNTIINEDRDIHYPVVEIATRSKLSSICWN
SYIKSQIASSNFEGVVQLWDVTRSQVQMEMREHERRVWSIDFSSADPTLLASGSDDGSVK
LWSINQGVSIGTIRTKANVCCVQFPLDSGRSIAFGSADHKIYYYDLRNAKVPLCTLVGHN
KTVSYVKFVDSTNIVSASTDNSLKLWDLSACTSRVIDTPVHSFTGHVNVKNFVGLSVFDG
YIATGSETNEVFIYHKAFPMPALQFQFNNFDPHSGNEMDKTNQFISSVCWRGQSNTLVAA
NSAGNIKLLEMV
NT seq 2739 nt   +upstreamnt  +downstreamnt
atgatatgcaggtttgaaccttcttatagatggatagcaatggagggatccactgagtct
actcgtatgaaatctagcagttctagggaattgaacgcctccagggtttctaacctcgat
ttgaggcttccacaaggtggtggaactggtttatctggtgttgtattgaatgacactagc
catagagagggagatgataacagggtttcgtttgctcacaatgattacgttcaaaaccag
ggtggtttatctggtgtttgtgaggatgaggtagcagtggacccttacgttcgtgccatt
gaatggggtgatatcagcttgaggcaatggttagataaaccagaacgctcagttgatgtc
tttgaatgcttacacatatttagacaaatagtggggattgtgaatgttgctcattctcaa
ggaatcgttgtcaataatgttcgaccttcttgctttgttatgtcttctttcaaccttgtc
tccttcattgagtctgcatcttgttctgattccgggtctgataatctcgaggatggctcg
aacagccccactcctgaaccaaaaacttcatccacatccttgcctgatgatgacttgtgt
acacagaaaagaaacccgggcagtgaagatcttcagccaatgaaggcttcagcgaacgcc
ttctcagaaacaagttgcatgcagtcaagctcaacctatgcaccccgtgaatcattggtt
gtggaaactgaagaaaatagaaacaaagataggaggagtgctgaagtagaagagaaaaaa
caaccatttccaatgaaacatgtattgcttatggagactaattggtacactagtcctgaa
gaggctactggtgcttcaagttcatgtgcttctgacatttacagacttggggttcttctt
tttgagttattctgtccatcgagttcgagagaagaaaaaagtagaacaatgtctagtcta
aggcatcgagttcttcctgctcagttgctactgaaatggccgaaagaagcttcattttgc
ttatggctactacatcctgaaccaactagtaggccaaaaatgggggaattgttacaaagt
gagttcttaaatgagccacgagatgacttagaagaacgtgaagcagccatagagctcagg
gagcaaatagaggagcaagaactgttgttggagtttcttctactaattcaacaaagaaag
ctagaggctgcggataagttgcaaaatactctttccttcctgtgttctgatattgaagaa
gttacgaagcaacaatcaattttgaagaaaaaaggcggttcatgtcctgatctagtgaag
gaagataactcaacatcaagtctcccttcaatgaatattgttattaatgatgattctact
agcttgggatccagaaaaagattcagaccaggattaaggaatcttcagttggaggaatgt
gatgataatattgatggtgagcaaaagtcagacagtgaagatcaagataacattctttta
aaaaattctcgattgatgaagaacttcaaaaagctagagtctgcatatttttcaacaaga
tgcaggcctgccaagctagcagggaaacatgtgattagacaaactccaataagtagtgat
ggtaagggttctgctattgtaagtgaaagaagttttgtcaataatttgacatcaaaagat
aggagctatgagagaagacaaagtggttggataaatcctttcttggaaggtttgtgcaag
tatctatctttcagtaaattgaaagtcaaagcagatttaaagcaaggggatcttctaaat
tcttcaaacctagtatgctccctcagctttgatcgtgatggggaattgtttgccacagct
ggtgttaataagaaaattaaagtttttgaatgcaacacaattataaacgaggatcgtgat
attcactatccagtggtggaaatagctactaggtcgaagcttagtagtatatgctggaat
agctatataaaaagtcagattgcttcaagtaactttgaaggtgtggttcagttatgggac
gtgacgaggagtcaagtgcaaatggagatgagagagcacgagaggcgtgtgtggtcaatt
gacttttcctcggcagatccaacattgttggccagcggaagtgatgatggttctgttaag
ctatggagtatcaatcagggggtgagcattggtacaatcagaacaaaggctaatgtctgc
tgcgttcagtttcccttggactctggtcgttccatagcgtttggttcagcagatcataaa
atttattactatgatctgcgcaatgcaaaggttcctctctgcacattagtaggacacaat
aagactgtgagttatgtcaagtttgtagatagtacaaatattgtgtcggcatccactgat
aactcattgaagctttgggatttgtcggcgtgtacatctcgtgttattgacactccagtt
cattccttcacaggtcacgtgaatgtaaagaactttgtgggattgtcagtttttgatggt
tacattgctactggctcggagacaaatgaggtttttatctaccacaaagctttccccatg
ccagcattacaattccagttcaacaacttcgacccacattctggcaacgaaatggacaaa
accaaccagtttatttcctctgtttgttggcgcggccagtccaacactttagttgcagca
aattcggcagggaacattaaacttctggagatggtttga

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